New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2122425 =	72 (1.220)	5 (0.090)	5/250	NT	6.7%	coding (1253/2928 nt)	PP_1886	hypothetical protein
	?	NC_002947	2122462 =	68 (1.180)					coding (1290/2928 nt)	PP_1886	hypothetical protein

CTCTTGCGGGCGATAGGCGCCGAAGGCAGGCATCGCCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2122465‑2122425 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaAGAGAGTGCGAACGGGATCGACCTGTGGAATGCAGGCAAAGGCAACGTCAGCTTTGAAATGCTCGGGCAGCCGCTGGGCCAGATAGCCAGCCTGGGCAATGGGCGCTC  >  NC_002947/2122462‑2122569                                                                                                                                                       CTCTTGCGGGCGATAGGCGCCGAAGGCAGGCATCGCCAGCAAGAGAGTGCGAACGGGATCGACCTGTGGAATGCAGGCAAAGGCAACGTCAGCTTTGAAATGCTCGGGCAGCCGCTGGGCCAGATAGCCAGCCTGGGCAATGGGCGCTC  >  5:206664/1‑149   CTTGCGGGCGATAGGCGCCGAAGGCAGGCATCGCCAGCAAGAGAGTGCGAACGGGATCGACCTGTGGAATGCAGGCAAAGGCAACGTCAGCTTTGAAATGCTCGGGCAGCCGCTGGGCCAGATAGCCAGCCTGGG              >  1:245112/1‑135   CTTGCGGGCGATAGGCGCCGAAGGCAGGCATCGCCAGCAAGAGAGTGCGAACGGGATCGACCTGTGGAATGCAGGCAAAGGCAACGTCAGCTTTGAAATGCTCGGGCAGCCGCTGGGCCAGATAGCCAGCCTGGG              <  2:245112/135‑1      GCGGGCGATAGGCGCCGAAGGCAGGCATCGCCAGCAAGAGAGTGCGAACGGGATCGACCTGTGGAATGCAGGCAAAGGCAAGGTCAGCTTTGAAATGCTCGGGCAGCCGCTGGGCCAGATAGC                       >  5:283143/1‑123      GCGGGCGATAGGCGCCGAAGGCAGGCATCGCCAGCAAGAGAGTGCGAACGGGATCGACCTGTGGAATGCAGGCAAAGGCAACGTCAGCTTTGAAATGCTCGGGCAGCCGCTGGGCCAGATAGC                       <  6:283143/123‑1                                                                                                                                                       CTCTTGCGGGCGATAGGCGCCGAAGGCAGGCATCGCCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2122465‑2122425 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaAGAGAGTGCGAACGGGATCGACCTGTGGAATGCAGGCAAAGGCAACGTCAGCTTTGAAATGCTCGGGCAGCCGCTGGGCCAGATAGCCAGCCTGGGCAATGGGCGCTC  >  NC_002947/2122462‑2122569

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.