New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2122773	54 (0.910)	6 (0.110)	4/246	NT	10.3%	coding (1601/2928 nt)	PP_1886	hypothetical protein
	?	NC_002947	= 2122831	53 (0.930)					coding (1659/2928 nt)	PP_1886	hypothetical protein

TACAACGCGCTTGTCCTGGTGAACAGCCAGCCACTGGTTTCGGTTGACCCACCTTTCGTACCCAGGGTCGGCCACGGTGAGACCACCCAGCTGAGCGAGGTGAACCGCATCATGCCCAACGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2122649‑2122773 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagcCCGGAAATGGCCCGATGGCGAGACGCTGCCCGGCCCTGCCAGCATCCGCCAACGCCGCGCTTCGTT  <  NC_002947/2122831‑2122766                                                                                                                                                                                                 TACAACGCGCTTGTCCTGGTGAACAGCCAGCCACTGGTTTCGGTTGACCCACCTTTCGTACCCAGGGTCGGCCACGGTGAGACCACCCAGCTGAGCGAGGTGAACCGCATCATGCCCAACGAAGCCCGGAAATGGCCCGATGGCGAGAC                                            >  1:80963/1‑149 TACAACGCGCTTGTCCTGGTGAACAGCCAGCAACTGGTTTCGGTTGACACACCTTTCGTACCCAGGGTCGGCCACGGTGAGACCACCCAGCTGAGCGAGGTGAACCGCATCATGCCCAACGAAGCCCGGAAATGGCCCGATGGCGAGAC                                            >  1:86205/1‑149                                           tTTGACCAAACTTTCGTACCCAGTGTCGTCCACGGTGAGACCACCTAGATGAGCGATGTGAACCGCATCATGCCCAACGAAGCCCGGAAATGGCCCGATGGCGAGACGCTGCCCGGCCCTGCCAGCATCCGCCAACGCCGCGCTTCGTT  <  2:80963/148‑1                                            TTGACCCACCTTTCGTACCCAGTGTAGGCCACGTTGAGACCACCAATCTGAGAGAGTTGAACCGCATCATGCCCAACGAAGCCCTGAAATGGCCCGATGGCGAGACGCTGCCCGGCCCTGCCATCATCCGCCAACGCCGCGCTTCGTT  <  2:86205/148‑1                                                                      GGCCACGGTGAGACCACCCAGCTGAGCGAGGTGAACCGCATCATGCCCAACGAAGCCCGGAAATGGCCCGATGGCGAGACGCTGCCCGGCCCTGCCAGCATCCGCCAACGCCGCGCTT      >  7:219712/1‑118                                                                      GGCCACGGTGAGACCACCCAGCTGAGCGAGGTGAACCGCATCATGCCCAACGAAGCCCGGAAATGGCCCGATGGCGAGACGCTGCCCGGCCCTGCCAGCATCCGCCAACGCCGCGCTT      <  8:219712/118‑1                                                                                                                                                                                                 TACAACGCGCTTGTCCTGGTGAACAGCCAGCCACTGGTTTCGGTTGACCCACCTTTCGTACCCAGGGTCGGCCACGGTGAGACCACCCAGCTGAGCGAGGTGAACCGCATCATGCCCAACGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2122649‑2122773 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagcCCGGAAATGGCCCGATGGCGAGACGCTGCCCGGCCCTGCCAGCATCCGCCAACGCCGCGCTTCGTT  <  NC_002947/2122831‑2122766

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.