| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2229000 = | 53 (0.900) | 3 (0.050) | 3/238 | NT | 6.2% | coding (136/783 nt) | ycfH | tRNA D‑aminoacylase |
| ? | NC_002947 | 2229067 = | 41 (0.750) | coding (203/783 nt) | ycfH | tRNA D‑aminoacylase | |||||
CCCGGTTTCACCAATCGCCACCACATGCGGGTGGGCCAGTTCGCGCAACAACCATTCCAACGCCGGGGTTTCGCCAGGGGCCAGGTCCAGCGGGTGCACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTGCACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2229155‑2229000‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcacccgcTGGACCTGGCCCCTGGCGAAACCCCGGCGTTGGAATGGTTGTTGCGCGAACTGGCCCACCCGCATGTGGTGGCGATTGGTGAAACCGGGCTGGATTACCACTACGAGCCGGAGGCTGCCGAGCTGCAGCAGGCCTCGTTCCGCCTGC > NC_002947/2229067‑2229213 CCCGGTTTCACCAATCGCCACCACATGCGGGTGGGCCAGTTCGCGCAACAACCATTCCAACGCCGGGGTTTCGCCAGGGGCCAGGTCCAGCGGGTGCACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTG > 5:320840/1‑149 GTTTCACCAATCGCCACCACATGCGGGTGGGCCAGTTCGCGCAACAACCATTCCAACGCCGGGGTTTCGCCAGGGGCCAGGTCCAGCGGGTGCACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTGCACC < 4:42047/149‑1 CCAATCGCCACCACATGCGGGTGGGCCAGTTCGCGCAACAACCATTCCAACGCCGGGGTTTCGCCAGGGGCCAGGTCCAGCGGGTGCACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACT < 5:261189/138‑1 CCAATCGCCACCACATGCGGGTGGGCCAGTTCGCGCAACAACCATTCCAACGCCGGGGTTTCGCCAGGGGCCAGGTCCAGCGGGTGCACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACT > 6:261189/1‑138 CAGCGGGTGCACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTGCACCCGCTGGACCTGGCCCCTGGCGAAACCCCGGCGTTGGAATGGTTGTTGCGCGAACTGGCCCACCCGCATGTGGTGGGGCTTGGT > 8:75897/1‑149 CGGGTGCACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTGCACCCGCTGGACCTGGCCCCTGGCGAAACCCCGGCGTTGGAATGGTTGTTGCGCGAACTGGCCCACCCGCATGTGGTGGCGATTG < 5:152032/144‑1 CGGGTGCACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTGCACCCGCTGGACCTGGCCCCTGGCGAAACCCCGGCGTTGGAATGGTTGTTGCGCGAACTGGCCCACCCGCATGTGGTGGCGATTG > 6:152032/1‑144 ACCCGCTGGACCTGGCCCCTGGCGAAACCCCGGCGTTGGAATGGTTGTTGCGCGAACTGGCCCACCCGCATGTGGTGGCGATTGGTGAAACCGGGCTGGATTACCACTACGAGCCGGAGGCTGCCGAGCTGCAGCAGGCCTCGTTCCGC < 2:229726/149‑1 CCCGCTGGACCTGGCCCCTGGCGAAACCCCGGCGTTGGAATGGTTGTTGCGCGAACTGGCCCACCCGCATGTGGTGGCGATTGGTGAAACCGGGCTGGATTACCACTACGAGCCGGAGGCTGCCGAGCTGCAGCAGGCCTCGTTCCGCC < 7:281913/149‑1 GCTGGACCTGGCCCCTGGCGAAACCCCGGCGTTGGAATGGTTGTTGCGCGAACTGGCCCACCCGCATGTGGTGGCGATTGGTGAAACCGGGCTGGATTACCACTACGAGCCGGAGGCTGCCGAGCTGCAGCAGGCCTCGTTCCGCCTGC > 6:295471/1‑149 CCCGGTTTCACCAATCGCCACCACATGCGGGTGGGCCAGTTCGCGCAACAACCATTCCAACGCCGGGGTTTCGCCAGGGGCCAGGTCCAGCGGGTGCACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTGCACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2229155‑2229000‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcacccgcTGGACCTGGCCCCTGGCGAAACCCCGGCGTTGGAATGGTTGTTGCGCGAACTGGCCCACCCGCATGTGGTGGCGATTGGTGAAACCGGGCTGGATTACCACTACGAGCCGGAGGCTGCCGAGCTGCAGCAGGCCTCGTTCCGCCTGC > NC_002947/2229067‑2229213 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |