| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2334268 = | 52 (0.880) | 3 (0.050) | 3/242 | NT | 5.6% | intergenic (+15/+65) | fadA/PP_2052 | 3‑ketoacyl‑CoA thiolase/bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase |
| ? | NC_002947 | 2334333 = | 52 (0.930) | coding (2124/2124 nt) | PP_2052 | bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase | |||||
ACGCGGAACTGATCGCTGCCATCCGTGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2334418‑2334268‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctggTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTTCCGCGTCCTTGACGGGGCACAACCCGGGGAAAGGTTTGTTGGCATGGGTGAGCACGGCTTCGACGCT > NC_002947/2334333‑2334479 ACGCGGAACTGATCGCTGCCATCCGTGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCT > 1:158613/1‑149 CGCGGAACTGATCGCTGCCATCCGTGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTG < 3:223552/149‑1 GCGGAACTGATCGCTGCCATCCGTGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGG > 6:27592/1‑149 CACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGG < 5:338930/106‑1 CACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGG > 6:338930/1‑106 TCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGGTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAG > 3:140616/1‑149 ATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGGTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTT > 6:58212/1‑149 AACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGGTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTTCC > 3:130213/1‑149 GCTGGTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTTCCGCGTCCTTGACGGGGCACAACCCGGGGAAAGGTTTGTTGGCATGGGTGAGCACGGCTTCGAC < 7:232736/149‑1 GTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTTCCGCGTCCTTGACGGGGCACAACCCGGGGAAAGGTTTGTTGGCATGGGTGAGCACGGCTTCGACGCT < 6:237127/148‑1 ACGCGGAACTGATCGCTGCCATCCGTGAAGGCTTCCGCCAATTGCCACAGCCGGCTCCGCGTCACGCGGTTGCTGTAGGCTCATAACCAGCCCTGGCCGGGACACTGTGGGCGCGAGTTGCGCCTGCGTCCCGGTCAGCGCCATGGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2334418‑2334268‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctggTTATGAGCCTACAGCAACCGCGTGACGCGGAGCCGGCTGTGGCAATTGGCGGAAGCCTTCACGGATGGCAGCGATCAGTTCCGCGTCCTTGACGGGGCACAACCCGGGGAAAGGTTTGTTGGCATGGGTGAGCACGGCTTCGACGCT > NC_002947/2334333‑2334479 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |