New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2354027 =	51 (0.860)	3 (0.050)	3/242	NT	5.3%	coding (505/1278 nt)	PP_2068	multidrug MFS transporter membrane fusion protein
	?	NC_002947	2354077 =	60 (1.070)					coding (455/1278 nt)	PP_2068	multidrug MFS transporter membrane fusion protein

CGTAGCCAAGGTCGAGGTGGCTGACGACCAGCCGGTGAAAGCCGGCGATGTGCTGGTGCGCCTGCAAAACCGCGACTACCGCGCCCGCCTCGACCAGGCCCGGGCTGGCGTGACCGAGGCACAGGCGGCACTGGCCGCCGCCCAGGCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2354178‑2354027 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagccCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACCCAGTCGGCGC  >  NC_002947/2354077‑2354218                                                                                                                                                                                                                                                                                                        CGTAGCCAAGGTCGAGGTGGCTGACGACCAGGCGGTGAAAGCCGGCGATGTGCTGGTGCGCCTGCAAAACCGCGACTACCGCGACCGCCTCGACCAGGCCCGGGCTGGCGTGACCGAGGCACAGGCGGCACTGGCCGCCGCCCAGGCC                                                                                                                                                    <  8:164158/148‑1                                                                                          TCGACCAGGCCCGGGCTGGCGTGACCGAGGCACAGGCGGCACTGGCCGCCGCCCAGGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCAC                                                          >  5:355286/1‑149                                                                                             ACCAGGCCCGGGCTGGCGTGACCGAGGCACAGGCGGCACTGGCCGCCGCCCAGGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTC                                                       <  6:355286/149‑1                                                                                                     CGGGCTGGCGTGACCGAGGCACAGGCGGCACTGGCCGCCGCCCAGGCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGA                                                     >  3:194114/1‑143                                                                                                                                                  GCCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACCCAGTCGGCGC  >  6:143576/1‑149                                                                                                                                                   CCAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGAACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGtt                                             >  6:156658/1‑103                                                                                                                                                    CAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCTCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACC            <  4:190831/137‑1                                                                                                                                                    CAGCCCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACC            >  3:190831/1‑137                                                                                                                                                        CCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGTCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAtt                  >  6:308836/1‑125                                                                                                                                                        CCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTGTTGCAGTCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGG                  <  5:303671/127‑1                                                                                                                                                                                                                                                                                                        CGTAGCCAAGGTCGAGGTGGCTGACGACCAGCCGGTGAAAGCCGGCGATGTGCTGGTGCGCCTGCAAAACCGCGACTACCGCGCCCGCCTCGACCAGGCCCGGGCTGGCGTGACCGAGGCACAGGCGGCACTGGCCGCCGCCCAGGCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2354178‑2354027 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagccCGGGCCTGGTCGAGGCGGGCGCGGTAGTCGCGGTTTTGCAGGCGCACCAGCACATCGCCGGCTTTCACCGGCTGGTCGTCAGCCACCTCGACCTTGGCTACGTAGCCCGCCACGCGTGGGCTCAGGGCCACCCAGTCGGCGC  >  NC_002947/2354077‑2354218

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.