New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2423612	61 (1.030)	5 (0.090)	4/250	NT	7.4%	coding (564/1248 nt)	PP_2124	glycosyl transferase
	?	NC_002947	= 2423660	65 (1.130)					coding (516/1248 nt)	PP_2124	glycosyl transferase

CCTCCAGATTGGCGCCGTATTCGAAATTGCCGACGAACAACAGACGCTGGCTGTGCAGCGCAGGTTGCACCTGCTGGTAGAAATCACAGTCCACGCCGTTGACCACCACATTCACCGGGCGCCCACTGATCTGCGCGATCAGCTCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2423464‑2423612 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaCCGTGTGCTGCGCCAGCCCACCGAACTGGTGGCTGTCAGCGCCCACGATGCCGA  <  NC_002947/2423660‑2423607                                                                                                                                                                                                             CCTCCAGATTGGCGCCGTATTCGAAATTGCCGACGAACAACAGACGCTGGCTGTGCAGCGCAGGTTGCACCTGCTGGTAGAAATCACAGTCCACGCCGTTGACCACCACATTCACCGGGCGCCCACTGATCTGCGCGATCAGCTCGGCA                                                        >  1:11218/1‑149                                                        CAGCGCAGGTTGCACCTGCTGGTAGAAATCACAGTCCACGCCGTTGACCACCACATTCACCGGGCGCCCACTGATCTGCGCGATCAGCTCGGCACCGTGTGCTGCGCCAGCCCACCGAACTGGTGGCTGTCAGCGCCCACGATGCCGA  <  2:158433/148‑1                                                                                        AGTCCACGCCGTTGACCACCACATTCACCGGGCGCCCACTGATCTGCGCGATCAGCTCGGCATCGTGTGCTGCGCCAGCCCACCGAACTGGTGGCTGTCAGCGCCCACGATGCC    >  3:67907/1‑114                                                                                        AGTCCACGCCGTTGACCACCACATTCACCGGGCGCCCACTGATCTGCGCGATCAGCTCGGCATCGTGTGCTGCGCCAGCCCACCGAACTGGTGGCTGTCAGCGCCCACGATGCC    <  4:67907/114‑1                                                                                                        CACCACATTCACCGGGCGCCCACTGATCTGCGCGATCAGCTCGGCACCGTGTGCTGCGCCAGCCCACCGAACTGGTGGCTGTCAGCGCCCACGATGCC    <  3:260434/98‑1                                                                                                        CACCACATTCACCGGGCGCCCACTGATCTGCGCGATCAGCTCGGCACCGTGTGCTGCGCCAGCCCACCGAACTGGTGGCTGTCAGCGCCCACGATGCC    >  4:260434/1‑98                                                                                                                                                                                                             CCTCCAGATTGGCGCCGTATTCGAAATTGCCGACGAACAACAGACGCTGGCTGTGCAGCGCAGGTTGCACCTGCTGGTAGAAATCACAGTCCACGCCGTTGACCACCACATTCACCGGGCGCCCACTGATCTGCGCGATCAGCTCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2423464‑2423612 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaCCGTGTGCTGCGCCAGCCCACCGAACTGGTGGCTGTCAGCGCCCACGATGCCGA  <  NC_002947/2423660‑2423607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.