New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2466698 =	69 (1.170)	4 (0.070)	4/246	NT	5.7%	coding (184/528 nt)	PP_2159	plastocyanin/azurin family copper‑binding protein
	?	NC_002947	2466737 =	65 (1.140)					coding (223/528 nt)	PP_2159	plastocyanin/azurin family copper‑binding protein

TTCGTGCGGCAGCTTGCCCTCGTTGACCAGCAAGAAGCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2466739‑2466698 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcacGAATTCAACCTGGGCGACAAGGCCATGCATGCCGAACACCAGAAGGAAATGGTCGCCATGCAAGGCAAGATGTTCACCGAGGCGATGAACCACGAAGGTATGGATCACGGCAAGATGATGAACCACGGCCAAATGATGGACCATGGT  >  NC_002947/2466737‑2466883                                                                                                                                                                                               TTCGTGCGGCAGCTTGCCCTCGTTGACCAGCAAGAAGCGCACGAATTCAACCTGGGCGACAAGGCCATGCATGCCGAACACCAGAAGGAAATGGTCGCCATGCAAGGCAAGATGT                                                                            <  7:234894/115‑1 TTCGTGCGGCAGCTTGCCCTCGTTGACCAGCAAGAAGCGCACGAATTCAACCTGGGCGACAAGGCCATGCATGCCGAACACCAGAAGGAAATGGTCGCCATGCAAGGCAAGATGT                                                                            >  8:234894/1‑115    GTGCGGCAGCTTGCCCTCGTTGACCAGCAAGAAGCGCACGCATTCAACCTGGGCGACAAGGCCATGCATGCCGAACACCAGAAGGAAATGGTCGCCATGCAAGGCAAGATGTTCACCGAGGCGATGAACCACGAAGGTATGGATCACGG                                       >  8:30328/1‑149         GCAGCTTGCCCTCGTTGACCAGCAAGAAGCGCACGTATTCAACCTGGGCGACAAGGCCATGCATGCCGAACACCAGAAGGAAATGGTCGCCATGCAAGGCAAGATGTTCACCGAGGCGATGAACCACGAAGGTATGGATCACGGCAAGA                                  <  7:30328/149‑1                                       GCACGAATTCAACCTGCCCGACAAGGCCATGCATGCCGAACACCAGAAGGAAATGGTCGCCATCCAAGCAAAGATGTTCACCGAGGCGATGAACCACGATGCTATGGATCACGCCAAGAAGATCAACCAAGGCAAAATGATGGAACATG    >  4:246662/1‑149                                         ACGAATTCAACCTGGGCGACAAGGCCATGCATGCCGAACACCAGAAGGAAATGGTCGCCATGCAGGGCAAGATGTTCACCGAGGCGATGAACCACGAAGGTATGGATCACGGCAAGATGATGAACCACGGCCAAATGATGGACCATGGT  >  6:308356/1‑149                                                                                                                                                                                               TTCGTGCGGCAGCTTGCCCTCGTTGACCAGCAAGAAGCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2466739‑2466698 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcacGAATTCAACCTGGGCGACAAGGCCATGCATGCCGAACACCAGAAGGAAATGGTCGCCATGCAAGGCAAGATGTTCACCGAGGCGATGAACCACGAAGGTATGGATCACGGCAAGATGATGAACCACGGCCAAATGATGGACCATGGT  >  NC_002947/2466737‑2466883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.