| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2617571 | 59 (1.000) | 4 (0.070) | 4/244 | NT | 6.5% | coding (98/504 nt) | PP_2289 | hypothetical protein |
| ? | NC_002947 | = 2617591 | 59 (1.050) | coding (118/504 nt) | PP_2289 | hypothetical protein | |||||
GTGTGCGGATACCTTTCCTCCGGCTACAAGGCCACTGTTATGTTGCGAGTAGCGTAATGACTGATACCAGCACCACCAGCACCACTCCAGCGGTATACACCACGGCTTCGGGCCCGGCCTATGCCAACGCTGACAAAACCGCCGTGACCCTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2617418‑2617571‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcacCAATCCCCGTGAAGGTGACAGTGAGGGTCACGGCGGTTTTGTCAGCGTTGGCATAGGCCGGGCCCGAAGCCGTGGTGTATACCGCTGGAGTGGTGCTGGTGGTGCTGGTATCAGTCATTACGCTACTCGCAACATAACAGTGGC < NC_002947/2617591‑2617448 GTGTGCGGATACCTTTCCTCCGGCTACAAGGCCACTGTTATGTTGCGAGTAGCGTAATGACTGATACCAGCACCACCAGCACCACTCCAGCGGTATACACCACGGCTTCGGGCCCGGCCTATGCCAACGCTGACAAAACCGCCGTGACC < 8:351419/149‑1 TGTGCGGATACCTTTCCTCCGGCTACAAGGCCACTGTTATGTTGCGAGTAGCGTAATGACTGATACCAGCACCACCAGCACCACTCCAGCGGTATACACCACGGCTTCGGGCCCGGCCTATGCCAACGCTGACAAAACCGCCGTGACCC < 4:202322/149‑1 TGTGCGGATACCTTTCCTCCGGCTACAAGGCCACTGTTATGTTGCGAGTAGCGTAATGACTGATACCAGCACCACCAGCACCACTCCAGCGGTATACACCACGGCTTCGGGCCCGGCCTATGCCAACGCTGACAAAACCGCCGTGACCC < 5:51495/149‑1 CCGGCTACAAGGCCACTGTTATGTTGCGAGTAGCGTAATGACTGATACCAGCACCACCAGCACCACTCCAGCGGTATACACCACGGCTTCGGTCCCGGCCTATGCCAACGCTGACAAAACCGCCGTGACC > 5:24483/1‑130 CCGGCTACAAGGCCACTGTTATGTTGCGAGTAGCGTAATGACTGATACCAGCACCACCAGCACCACTCCAGCGGTATACACCACGGCTTCGGTCCCGGCCTATGCCAACGCTGACAAAACCGCCGTGACC < 6:24483/130‑1 AGCACCACCAGCACCACTCCAGCGGTATACACCACGGCTTCGGGCCCGGCCTATGCCAACGCTGACAAAACCGCCGTGACCCTCACCAATCCCCGTGAAGGTGACAGTGAGG < 7:184716/112‑1 AGCACCACCAGCACCACTCCAGCGGTATACACCACGGCTTCGGGCCCGGCCTATGCCAACGCTGACAAAACCGCCGTGACCCTCACCAATCCCCGTGAAGGTGACAGTGAGG > 8:184716/1‑112 GGCCCGGCCTATGCCAACGCTGACAAAACCGCCGTGACCCTCACCAATCCCCGTGAAGGTGACAGTGAGGGTCA > 1:59020/1‑74 GGCCCGGCCTATGCCAACGCTGACAAAACCGCCGTGACCCTCACCAATCCCCGTGAAGGTGACAGTGAGGGTCA < 2:59020/74‑1 CTCACCAATCCCCGTTAAGGTGACAGTGAGGGTCACGGCGGTTTTGTCAGCGTTGGCATAGGCCGGGCCCGAAGCCGTGGTGTATACCGCTGGAGTGGTGCTGGTGGTGCTGGTATCAGTCATTACGCTACTCGCAACATAACAGTGGC < 7:311666/149‑1 ACCAATCCCCGTGAAGGTGACAGTGAGGGTCACGGCGGTTTTGTCAGCGTTGGCA > 7:149934/1‑55 ACCAATCCCCGTGAAGGTGACAGTGAGGGTCACGGCGGTTTTGTCAGCGTTGGCA < 8:149934/55‑1 GTGTGCGGATACCTTTCCTCCGGCTACAAGGCCACTGTTATGTTGCGAGTAGCGTAATGACTGATACCAGCACCACCAGCACCACTCCAGCGGTATACACCACGGCTTCGGGCCCGGCCTATGCCAACGCTGACAAAACCGCCGTGACCCTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2617418‑2617571‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcacCAATCCCCGTGAAGGTGACAGTGAGGGTCACGGCGGTTTTGTCAGCGTTGGCATAGGCCGGGCCCGAAGCCGTGGTGTATACCGCTGGAGTGGTGCTGGTGGTGCTGGTATCAGTCATTACGCTACTCGCAACATAACAGTGGC < NC_002947/2617591‑2617448 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |