New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2653229 | 61 (1.030) | 4 (0.070) | 4/240 | NT | 6.1% | coding (616/948 nt) | PP_2325 | 2‑dehydropantoate 2‑reductase |
? | NC_002947 | = 2653262 | 66 (1.190) | coding (649/948 nt) | PP_2325 | 2‑dehydropantoate 2‑reductase |
ATCACAGTGGGCCGGCCTCCGATTGCGGTGTCGCGCTGGTGAATGAAGGCGCCGGGTTGTTCCAGGCTGCGGGGATCGACTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2653074‑2653229 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgtcggCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACCGACAGCCCGTTGTAAGGCACGTTCCACACCAGCTTCTGCCAGCGCGCCAAGGCCAGGTTCGGCATGGCCTGCGAGTCGATCCCCGCAGCCTGGAACAACCCGGCGCCTTCATT < NC_002947/2653262‑2653115 ATCACAGTGGGCCGGCCTCCGATTGCGGTGTCGCGCTGGTGAATGAAGGCGCCGGGTTGTTCCAGGCTGCGGGGATCGACTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGG > 4:180773/1‑149 CACAGTGGGCCGGCCTCCGATTGCGGTGTCGCGCTGGTGAATGAAGGCGCCGGGTTGTTCCAGGCTGCGGGGATCGACTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCT > 3:279551/1‑149 ACAGTGGGCCGGCCTCCGATTGCGGTGTCGCGCTGGTGAATGAAGGCGCCGGGTTGTTCCAGGCTGCGGGGATCGACTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTG > 3:340652/1‑149 AGTGGGCCGGCCTCCGATTGCGGTGTCGCGCTGGTGAATGAAGGCGCCGGGTTGTTCCAGGCTGCGGGGATCGACTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTC > 5:241634/1‑149 CGCTGGTGAATGAAGGCGCCGGGTTGTTCCAGGCTGCGGGGATCGACTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGCCATCAGTGGCGAAGTGCTGGCCCC > 5:254427/1‑148 ATGAAGGCGCCGGGTTGTTCCAGGCTGCGGGGATCGACTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACC > 6:160611/1‑149 AGGCGCCGGGTTGTTCCAGGCTGCGGGGATCGACTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACCGACA < 5:160611/149‑1 TTCCAGGCTGCGGGGATCGACTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGGCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACCGACAGCCCGTTGTAAG < 6:254427/148‑1 CTGTCGGCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACCGCCAGCCCGTTGTAAGGCACGTTCCCCACCAGCTTCTGCCAGCGCGCCAAGGCCAGGTTCGGCATGGCCTGCGAGTCGATCCCCGCAGCCTGGAACAACCCGGCGCC > 2:83559/1‑149 TCGTCCATCATTGGCGAAGTGCTGGCCCCCAGCAGCACCGACAGCACGTTGTAAGGCACGTTCCACACCAGCTTCTGCCAGCGCGCCAAGGCCAGGTTCGGCATGGCCTGCGAGTCGATCCCCGCAGCCTGGAACAACCCGGCGCCT < 5:55199/147‑1 TCGGCCATCAGTGTCGAAGTGCTGGCCCCCAGCAGCACCGACAGCCCGTTGTAAGGCACGTTCCACACCAGCTTCTGCCAGCGCGCCAA < 3:188486/89‑1 TCGGCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACCGACAGCCCGTTGTAAGGCACGTTCCACACCAGCTTCTGCCAGCGCGCCAA > 4:188486/1‑89 GCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACGGACAGCCCGTTGTAAGGCACGTTCCACACCAGCTTCTGCCAGCGCGCCAAGGCCAGGTTCGGCATGGCCTGCGA > 8:160053/1‑110 GCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACCGACAGCCCGTTGTAAGGCACGTTCCACACCAGCTTCTGCCAGCGCGCCAAGGCCAGGTTCGGCATGGCCTGCGAGTCGATCCCCGCAGCCTGGAACAACCCGGCGCCTTCATT < 8:112259/149‑1 GCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACCGACAGCCCGTTGTAAGGCACGTTCCACACCAGCTTCTGCCAGCGCGCCAAGGCCAGGTTCGGCATGGCCTGCGA < 7:160053/110‑1 ATCACAGTGGGCCGGCCTCCGATTGCGGTGTCGCGCTGGTGAATGAAGGCGCCGGGTTGTTCCAGGCTGCGGGGATCGACTCGCAGGCCATGCCGAACCTGGCCTTGGCGCGCTGGCAGAAGCTGGTGTGGAACGTGCCTTACAACGGGCTGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2653074‑2653229 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgtcggCCATCAGTGGCGAAGTGCTGGCCCCCAGCAGCACCGACAGCCCGTTGTAAGGCACGTTCCACACCAGCTTCTGCCAGCGCGCCAAGGCCAGGTTCGGCATGGCCTGCGAGTCGATCCCCGCAGCCTGGAACAACCCGGCGCCTTCATT < NC_002947/2653262‑2653115 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |