| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2713658 | 59 (1.000) | 4 (0.070) | 4/242 | NT | 6.4% | coding (1446/3708 nt) | metH | cobalamin‑dependent methionine synthase |
| ? | NC_002947 | = 2713686 | 62 (1.110) | coding (1418/3708 nt) | metH | cobalamin‑dependent methionine synthase | |||||
GCGACGGCAAAGATGTTCGGGTCGAAGATGATGTCTTCTGGCGGGAAGCCCACTTCGTTGACCAGGATGTCATAGCTGCGCTGGCAGATTTCCTTCTTGCGCGCGGCTGTGTCGGCCTGGCCGACTTCGTCGAAGGCCATGACCACCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2713509‑2713658‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccacgCCCGCCTGTGCAAGCGCTATGGC‑GCTGCCGTGGTGGTCATGGCCTTCGACGAAGTCGGCCAGGCCGACACAGCCGCGCGCAAGAAGGAAATCTGCCAGCGCAGCTATGACATCCTGGTCAACGAAGTGGGCTTCCCGCCAGAAGACA < NC_002947/2713686‑2713540 GCGACGGCAAAGATGTTCGGGTCGAAGATGATGTCTTCTGGCGGGAAGCCCACTTCGTTGACCAGGATGTCATAGCTGCGCTGGCAGATTTCCTTCTTGCGCGCGGCTGTGTCGGCCTGGCCGACTTCGTCGAAGGCCATGACCACCAC > 7:16032/1‑149GCGACGGCAAAGATGTTCGGGTCGAAGATGATGTCTTCTGGCGGGAAGCCCACTTCGTTGACCAGGATGTCATAGCTGCGCTGGCAGATTTCCTTCTTGCGCGCGGCTGTGTCGGCCTGGCCGACTTCGTCGAAGGCCATGACCACCA < 6:233760/148‑1 CGGGTCGAAGATGATGTCTTCTGGCGGGAAGCCCACTTCGTTGACCAGGATGTCATAGCTGCGCTGGCAGATTTCCTTCTTGCGCGCGGCTGTGTCGGCCTGGCCGACTTCGTCGAAGGCCATGACCACCACGCCCGCCTGTGCAAGCG > 2:368486/1‑149 CTGGCGGGAAGCCCACTTCGTTGACCAGGATGTCATAGCTGCGCTGGCAGATTTCCTTCTTGCGCGCGGCTGTGTCGGCCTGGCCGACTTCGTCGAAGGCCATGACCACCACGCCCGCCTGTGCAAGCGCTATGGC‑GCTGCCGTGGTG < 1:368486/148‑1 GCGGGAAGCCCACTTCGTTGACCAGGATGTCATAGCTGCGCTGGCAGATTTCCTTCTTGCGCGCGGCTGTGTCGGCCTGGCCGACTTCGTCGAAGGCCATGACCACCACGCCCGCCTGTGCAAGCGCTATGGC‑GCTGCCGTGGTGGTC < 6:18807/148‑1 GCGGGAAGCCCACTTCGTTGACCAGGATGTCATAGCTGCGCTGGCAGATTTCCTTCTTGCGCGCGGCTGTGTCGGCCTGGCCGACTTCGTCGAAGGCCATGACCACCACGCCCGCCTGTGCAAGCGCTATGGC‑GCTGCCGTGGTGG < 1:173345/146‑1 ACCACGCCCGCCTGTGCAAGCGCTATGGC‑GCTGCCGTGGTGGTCATGGCCTTCGACGAAGTCGGCCAGGCCGACACAGCCGCGCGCAAGAAGGAAATCTGCCAGCGCAGCTATGACATCCTGGTCAACGAAGTGGGCTTCCCGCCAGAA < 1:196651/149‑1 ACCACGCCCGCCTGTGCAAGCGCTATGGC‑GCTGCCGTGGTGGTCATGGCCTTCGACGAAGTCGGCCAGGCCGACACAGCCGCGCGCAAGAAGGAAATCTGCCAGCGCAGCTATGACATCCTGGTCAACGAAGTGGGCTTCCCGCCAGAA < 7:264942/149‑1 CCACGCCCGCCTGTGCAAGCGCTATGGC‑GCTGCCGTGGTGGTCATGGCCTTCGACGAAGTCGGCCAGGCCGACACAGCCGCGCGCAAGAAGGAAATCTGCCAGCGCAGCTATGACATCCTGGTCAACGAAGTGGGCTTCCCGCCAGAAG < 4:261535/149‑1 CACGCCCGCCTGTGCAAGCGCTATGGCGGCTGCCGTGGTGGTCATGGCCTTCGACGAAGTCGGCCAGGCCGACACAGCCGCGCGCAAGAAGGAAATCTGCCAGCGCAGCTATGACATCCTGGTCAACGAAGTGGGCTTCCCGCCAG > 1:209189/1‑146 CACGCCCGCCTGTGCAAGCGCTATGGC‑GCTGCCGTGGTGGTCATGGCCTTCGACGAAGTCGGCCAGGCCGACACAGCCGCGCGCAAGAAGGAAATCTGCCAGCGCAGCTATGACATCCTGGTCAACGAAGTGGGCTTCCCGCCAGAAGA < 4:337291/149‑1 CACGCCCGCCTGTGCAAGCGCTATGGC‑GCTGCCGTGGTGGTCATGGCCTTCGACGAAGTCGGCCAGGCCGACACAGCCGCGCGCAAGAAGGAAATCTGCCAGCGCAGCTATGACATCCTGGTCAACGAAGTGGGCTTCCCGCCAGAAGA > 4:377296/1‑149 CACGCCCGCCTGTGCAAGCGCTATGGC‑GCTGCCGTGGTGGTCATGGCCTTCGACGAAGTCGGCCAGGCCGACACAGCCGCGCGCAAGAAGGAAATCTGCCAGCGCAGCTATGACATCCTGGTCAACGAAGTGGGCTTCCCGCCAGAAG > 8:125115/1‑148 GCCCGCCTGTGCAAGCGCTATGGC‑GCTGCCGTGGTGGTCATGGCCTTCGACGAAGTCGGCCAGGCCGACACAGCCGCGCGCAAGAAGGAAATCTGCCAGCGCAGCTATGACATCCTGGTCAACGAAGTGGGCTTCCCGCCAGAAGACA > 3:331288/1‑148 GCCCGCCTGTGCAAGCGCTATGGC‑GCTGCCGTGGTGGTCATGGCCTTCGACGAAGTCGGCCAGGCCGACACAGCCGCGCGCAAGAAGGAAATCTGCCAGCGCAGCTATGACATCCTGG < 1:280511/118‑1 GCCCGCCTGTGCAAGCGCTATGGC‑GCTGCCGTGGTGGTCATGGCCTTCGACGAAGTCGGCCAGGCCGACACAGCCGCGCGCAAGAAGGAAATCTGCCAGCGCAGCTATGACATCCTGG > 2:280511/1‑118 GCGACGGCAAAGATGTTCGGGTCGAAGATGATGTCTTCTGGCGGGAAGCCCACTTCGTTGACCAGGATGTCATAGCTGCGCTGGCAGATTTCCTTCTTGCGCGCGGCTGTGTCGGCCTGGCCGACTTCGTCGAAGGCCATGACCACCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2713509‑2713658‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccacgCCCGCCTGTGCAAGCGCTATGGC‑GCTGCCGTGGTGGTCATGGCCTTCGACGAAGTCGGCCAGGCCGACACAGCCGCGCGCAAGAAGGAAATCTGCCAGCGCAGCTATGACATCCTGGTCAACGAAGTGGGCTTCCCGCCAGAAGACA < NC_002947/2713686‑2713540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |