New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2730804 = | 57 (0.960) | 6 (0.110) | 6/236 | NT | 10.3% | coding (141/2361 nt) | polB | DNA polymerase II |
? | NC_002947 | 2730878 = | 52 (0.950) | coding (215/2361 nt) | polB | DNA polymerase II |
GTGCGCAGACGCTGCTCCAGTTGCATCAATTGGCGATGCTGGCGGGTATAGAGGCCGAGCATCGGGCGATGCTCGAAGTCCTTCAGGCGCAGTGGCTTGAGCTTCGTCCCGGTTTCGTTGGCCAGCAGCACACGGGCGTGCTCGGCCTGCGCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2730959‑2730804 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcctgaAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAG > NC_002947/2730878‑2731017 GTGCGCAGACGCTGCTCCAGTTGCATCAATTGGCGATGCTGGCGGGTATAGAGGCCGAGCATCGGGCGATGGTCGAAGTCCTTCAGGCGCAGTGGCTTGAGATTAGTCCCGGTTTCGTTGGCCAGCAGCACACGGGCGTGCTCGGCCTG > 3:310463/1‑149 GCAGACGCTGCTCCAGTTGCATCAATTGGCGATGGTGGCGGGTATAGAGGCCGAGCATCGGGCGATGCTCGAAGTCCTTCAGGCGCAGTGGCTTGAGCTTCGTCCCGGTTTCGTTGGCCAGCAGCACACTGTCGTGCTCGTCCTGCGCC > 7:354156/1‑149 CAGACGCTGCTCCAGTTGCATCAATTGGCGATGCTGGCGGGTATAGAGGCCGAGCATCGGGCGATGCTCGAAGTCCTTCAGGCGCAGTGGCTTGAGCTTCGTCCCGGTTTCGTTGGCCAGCAGCACACGGGCGTGCTCGGCCTGCGCCT > 2:233348/1‑149 GACGCTGCTCCAGTTGCATCAATTGGCGATGCTGGCGGGTATAGAGGCCGAGCATCGGGCGATGCTCGAAGTCCTTCAGGCGCAGTGGCTTGAGCTTCGTCCCGGTTTCGTTGGCCAGCAGCACACGGGCGTTCTCGGCCTGCGCCTGA < 6:245220/149‑1 TTCAGGCGCAGTGGCTTGAGCTTCGTCCCGGTTTCGTTGGCCAGCAGCACACGGGCGTGCTCGGCCTGCGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGT > 2:59190/1‑149 CAGGCGCAGTGGCTTGAGCTTCGTCCCGGTTTCGTTGGCCAGCAGCACACGGGCGTGCTCGGCCTGCGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCT > 5:39140/1‑149 GCGCAGTGGCTTGAGCTTCGTCCCGGTTTCGTTGGCCAGCAGCACACGGGCGTGCTCGGCCTGCGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCG > 1:36674/1‑149 GCTTGAGCTTCGTCCCGGTTTCGTTGGCCAGCAGCACACGGGCGTGCTCGGCCTGCGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCG < 6:39140/149‑1 GGCCAGCAGCACACGGGCGTGCTCGGCCTGCGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATA < 2:36674/148‑1 GGGCGTGCTCGGCCTGCGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGC < 1:59190/149‑1 CTGCGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGA < 5:245220/149‑1 CGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAG < 1:202548/147‑1 TGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATG < 7:130095/140‑1 TGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATG > 8:130095/1‑140 GTGCGCAGACGCTGCTCCAGTTGCATCAATTGGCGATGCTGGCGGGTATAGAGGCCGAGCATCGGGCGATGCTCGAAGTCCTTCAGGCGCAGTGGCTTGAGCTTCGTCCCGGTTTCGTTGGCCAGCAGCACACGGGCGTGCTCGGCCTGCGCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2730959‑2730804 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcctgaAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAG > NC_002947/2730878‑2731017 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |