New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2758042 | 56 (0.950) | 4 (0.070) | 4/238 | NT | 7.0% | coding (150/1338 nt) | PP_2411 | MFS transporter |
? | NC_002947 | = 2758074 | 55 (1.000) | coding (118/1338 nt) | PP_2411 | MFS transporter |
AACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2757890‑2758042 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgctgATCGCCAGCCAGTTCTTCGCCAGCGAAGACGCCAGCGTGGCCTTGCTCAAAACCTTCGCGGTGTTCGCCGTGGCCTTTGCGCTGCGCCCTTTGGGCGGCATCGTCTTCGGCGCCTTGGGCGACCGCCTGGGACGCAAGCGCATC < NC_002947/2758074‑2757931 AACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCA < 7:155999/148‑1 GATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGATCGCCAGCCAGTTCTTCGC > 5:292138/1‑147 GCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGATCGCCAGCCAGTTCTTCGCCAGCGAAGACGCCAGCGTGGCC < 6:292138/149‑1 GCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGATCGCCAGCCAGTTCTTCGCCAGCGAAGACGCCAGCGT < 1:139038/126‑1 GCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTGATCGCCAGCCAGTTCTTCGCCAGCGAAGACGCCAGCGT > 2:139038/1‑126 GCCACGCTGATCGCCAGCCAGTTCTTCGCCAGCGAAGACGCCAGCGTGGCCTTGCTCAAAACCTTCGCGGTGTTCGTCGTGGCCTTTGCGCTGCGCCCTTTGGGCGGCATCGTCTTCGGCGCCTTGGGCGACCGCCTGGGACGCAAGCG > 1:325332/1‑149 GCCACGCTGATCGCCAGCCAGTTCTTCGCCAGCGAAGACGCCAGCGTGGCCTTGCTCAAAACCTTCGCGGTGTTCGCCGTGGCCTTTGCGCTGCGCCCTTTGGGCGGCATCGTCTTCGGCGCCTTGGGCGACCGCCTGGGACGCAAGCG < 1:6332/149‑1 GCCACGCTGATCGCCAGCCAGTTCTTCGCCAGCGAAGACGCCAGCGTGGCCTTGCTCAAAACCTTCGCGGTGTTCGCCGTGGCCTTTGCGCTGCGCCCTTTGGGCGGCATCGTCTTCGGCGCCTTGGGCGACCGCCTGGGACGCAAGC < 5:52856/148‑1 CCACGCTGATCGCCAGCCAGTTCTTCGCCAGCGAAGACGCCAGCGTGGCCTTGCTCAAAACCTTCGCGGTGTTCGCCGTGGCCTTTGCGCTGCGCCCTTTGGGCGGCATCGTCTTCGGCGCCTTGGGCGACCGCCTGGGACGCAAGCG > 1:273525/1‑148 CGCTGATCGCCAGCCAGTTCTTCGCCAGCGAAGACGCCAGCGTGGCCTTGCTCAAAACCTTCGCGGTGTTCGCCGTGGCCTTTGCGCTGCGCCCTTTGGGCGGCATCGTCTTCGGCGCCTTGGGCGACCGCCTGGGACGCAAGCGCATC < 7:286722/149‑1 AACGTGGTGGAGCCGGCCATCAGCAAGATGGTCAGCGACAGGATGCGCTTGCGTCCCAGGCGGTCGCCCAAGGCGCCGAAGACGATGCCGCCCAAAGGGCGCAGCGCAAAGGCCACGGCGAACACCGCGAAGGTTTTGAGCAAGGCCACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2757890‑2758042 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgctgATCGCCAGCCAGTTCTTCGCCAGCGAAGACGCCAGCGTGGCCTTGCTCAAAACCTTCGCGGTGTTCGCCGTGGCCTTTGCGCTGCGCCCTTTGGGCGGCATCGTCTTCGGCGCCTTGGGCGACCGCCTGGGACGCAAGCGCATC < NC_002947/2758074‑2757931 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |