New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 277720349 (0.830)6 (0.110) 4/244 NT 10.7% coding (302/585 nt) PP_2429 membrane protein
?NC_002947 = 2777224 53 (0.940)coding (281/585 nt) PP_2429 membrane protein

CTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCAACCAGACCTTGGGGTTCACCACCTGCAACGAGGCCGCACTGAGCGCACTGAAGCCTTGTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2777050‑2777203
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgccgCCGCCCCGCTCCATGCGGCCACGGCACAAGGCTTCAGTGCGCTCAGTGCGGCCTCGTTGCAGGTGGTGAACCCCAAGGTCTGGTTGATGGCCGTGGCGGTGGTCGGGGTATTTGCCGCGCCGTCGTTGCCAGTGTGGCAGCTGGCGCT  <  NC_002947/2777224‑2777077
                                                                                                                                                                                                                                                                                                              
CTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCAACCAGACCTTGGGGTTCACCACCTGCAACGAGGCCGCACTGAGCGCACTGAAGCCTTG                                                                                                                                                           >  8:146752/1‑149
   GGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCAACCAGACCTTGGGGTTCACCACCTGCAACGAGGCCGCACTGAGCGCACTGAAGCCTTGTGC                                                                                                                                                        >  1:74891/1‑149
    GCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCAACCAGACCTTGGGGTTCACCACCTGCAACGAGGCCGCACTGAGCGCACTGAAGCCTTGTGCC                                                                                                                                                       <  4:166646/149‑1
    GCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCAACCAGACCTTGGGGTTCACCACCTGCAACGAGGCCGCACTGAGCGCACTGAAGCCTTGTGCC                                                                                                                                                       <  4:355293/149‑1
     CAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCAACCAGACCTTGGGGTTCACCACCTGCAACGAGGCCGCACTGAGCGCACTGAAGCCTTGTGCCG                                                                                                                                                      >  5:48612/1‑149
                                   CTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCAACCAGACCTTGGGGTTCACCACCTGCAACGAGGCCGCACTGAGCGCACTGAAGCCTTGTGCCGCCGCCCCGCTCCATGCGGCCACGGCACAAG                                                                                                                        <  6:389519/149‑1
                                   CTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCAACCAGACCTTGGGGTTCACCACCTGCAACGAGGCCGCACTGAGCGCACTGAAGCCTTGTGCCGCCGCCCCGCTCCATGCGGCCACGGCACAAG                                                                                                                        <  4:224051/149‑1
                                                                                         CAACCAGACCTTGGGGTTCACCACCTGCAACGAGGCCGCACTGAGCGCACTGAAGCCTTGTGCCGCCGCCCCGCTCCATGCGGCCACGG                                                                                                                              >  8:67192/1‑89
                                                                                         CAACCAGACCTTGGGGTTCACCACCTGCAACGAGGCCGCACTGAGCGCACTGAAGCCTTGTGCCGCCGCCCCGCTCCATGCGGCCACGG                                                                                                                              <  7:67192/89‑1
                                                                                           ACCAGACCTTGGGGTTCACCACCTGCAACGAGGCCGCACTGAGCGCACTGAAGCCTTGTGCCGCCGCCCCGCTCCATGCGGCCACGGCACAAG                                                                                                                        >  2:173906/1‑93
                                                                                           ACCAGACCTTGGGGTTCACCACCTGCAACGAGGCCGCACTGAGCGCACTGAAGCCTTGTGCCGCCGCCCCGCTCCATGCGGCCACGGCACAAG                                                                                                                        <  1:173906/93‑1
                                                                                                                                                     TGCCGCCGCCCCGCTCCATGCGGCCACGGCACAAGGCTTCAGTGCGCTCAGTGCGGCCTCGTTGCAGGTGGTGAACCCCAAGGTCTGGTTGATGGCCGTGGCGGTGGTCGGGGTATTTGCCGCGCCGTCGTTGCCAGTGTGGCAGCTGG      >  7:146752/1‑149
                                                                                                                                                     TGCCGCCGCCCCGCTCCATGCGGCCACGGCACAAGGCTTCAGTGCGCTCAGTGCGGCCTCGTTGCAGGTGGTGAACCCCAAGGTCTGGTTGATGGCCGTGGCGGTGGTCGGGGTATTTGCCGCGCCGTCGTTGCCAGTGTGGCAGCTGG      >  1:80506/1‑149
                                                                                                                                                     TGCCGCCGCCCCGCTCCATGCGGCCACGGCACAAGGCTTCAGTGCGCTCAGTGCGGCCTCGTTGCAGGTGGTGAACCCCAAGGTCTGGTTGATGGCCGTGGCGGTGGTCGGGGTATTTGCCGCGCCGTCGTTGCCAGTGTGGCAGCTGG      >  8:339823/1‑149
                                                                                                                                                       CCGCCGCCCCGCTCCATGCGGCCACGGCACAAGGCTTCAGTGCGCTCAGTGCGGCCTCGTTGCAGGTGGTGAACCCCAAGGTCTGGTTGATGGCCGTGGCGGTGGTCGGGGTATTTGCCGCGCCGTCGTTGCCAGTGTGGCAGCTGGCG    >  7:57030/1‑149
                                                                                                                                                       CCGCCGCCCCGCTCCATGCGGCCACGGCACAAGGCTTCAGTGCGCTCAGTGCGGCCTCGTTGCAGGTGGTGAACCCCAAGGTCTGGTTGATGGCCGTGGCGGTGGTCGGGGTATTTGCCGCGCCGT                           >  2:100796/1‑126
                                                                                                                                                       CCGCCGCCCCGCTCCATGCGGCCACGGCACAAGGCTTCAGTGCGCTCAGTGCGGCCTCGTTGCAGGTGGTGAACCCCAAGGTCTGGTTGATGGCCGTGGCGGTGGTCGGGGTATTTGCCGCGCCGT                           <  1:100796/126‑1
                                                                                                                                                       CCGCCGCCCCGCTCCATGCGGCCACGGCACAAGGCTTCAGTGCGCTCAGTGCGGCCTCGTTGCAGGTGGTGAACCCCAAGGTCTG                                                                    <  7:289772/85‑1
                                                                                                                                                       CCGCCGCCCCGCTCCATGCGGCCACGGCACAAGGCTTCAGTGCGCTCAGTGCGGCCTCGTTGCAGGTGGTGAACCCCAAGGTCTG                                                                    >  8:289772/1‑85
                                                                                                                                                         GCCGCCCCGCTCCATGCGGCCACGGCACAAGGCTTCAGTGCGCTCAGTGCGGCCTCGTTGCAGGTGGTGAACCCCAAGGTCTGGTTGATGGCCGTGGCGGTGGTCGGGGTATTTGCCGCGCCGTCGTTGCCAGTGTGGCAGCTGGCGCT  >  6:48612/1‑149
                                                                                                                                                         GCCGCCCCGCTCCATGCGGCCACGGCACAAGGCTTCAGTGCGCTCAGTGCGGCCTCGTTGCAGGTGGTGAACCCCAAGGTCTGGTTGATGGCCGTGGCGGTGGTCGGGGTATTTGCCGCGCCGTCGTTGCCAGTGTGGCAGCTGGCGCT  <  8:223527/149‑1
                                                                                                                                                                                                                                                                                                              
CTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCAACCAGACCTTGGGGTTCACCACCTGCAACGAGGCCGCACTGAGCGCACTGAAGCCTTGTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2777050‑2777203
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgccgCCGCCCCGCTCCATGCGGCCACGGCACAAGGCTTCAGTGCGCTCAGTGCGGCCTCGTTGCAGGTGGTGAACCCCAAGGTCTGGTTGATGGCCGTGGCGGTGGTCGGGGTATTTGCCGCGCCGTCGTTGCCAGTGTGGCAGCTGGCGCT  <  NC_002947/2777224‑2777077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.