| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2781605 | 61 (1.030) | 4 (0.070) | 4/244 | NT | 6.7% | coding (761/1218 nt) | iscS‑II | cysteine desulfurase |
| ? | NC_002947 | = 2781641 | 53 (0.940) | coding (725/1218 nt) | iscS‑II | cysteine desulfurase | |||||
ATGGCCAGCAGGCCTGTGCGCAGGCGTCTTGCCAGTTGCTCAAGGCGCTGGTGCTCGCTGTCGCCAGGTTGGCCGGCCAAGGCAAAGGCACTGCCCATGCCCGCTATCTGATGGGTCGCCAGGGTGCCGGAACGCAGGCCCTGCTCATGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2781452‑2781605‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcGCGCTCGCGTGCTGATGCGTGCGCAGATGCACGGCGGCGGCCATGAGCAGGGCCTGCGTTCCGGCACCCTGGCGACCCATCAGATAGCGGGCATGGGCAGTGCCTTTGCCTTGGCCGGCCAACCTGGCGACAGCGAGCACCAGCGCC < NC_002947/2781641‑2781495 ATGGCCAGCAGGCCTGTGCGCAGGCGTCTTGCCAGTTGCTCAAGGCGCTGGTGCTCGCTGTCGCCAGGTTGGCCGGCCAAGGCAAAGGCACTGCCCATGCCCGCTATCTGATGGGTCGCCAGGGTGCCGGAACGCAGGCCCTGCTCATG < 7:230209/149‑1ATGGCCAGCAGGCCTGTGCGCAGGCGTCTTGCCAGTTGCTCAAGGCGCTGGTGCTCGCTGTCGCCAGGTTGGCCGGCCAAGGCAAAGGCACTGCCCATGCCCGCTATCTGATGGGTCGCCAGGGTGCCGGAACGCAGGCCCTGCTCATG < 4:158358/149‑1 TGGCCAGCAGGCCTGTGCGCAGGCGTCTTGCCAGTTGCTCAAGGCGCTGGTGCTCGCTGTCGCCAGGTTGGCCGGCCAAGGCAAAGGCACTGCCCATGCCCGCTATCTGATGGGTCGCCAGGGTGCCGGAACGCAGGCCCTGCTCATGG < 2:294334/149‑1 GCCAGCAGGCCTGTGCGCAGGCGTCTTGCCAGTTGCTCAAGGCGCTGGTGCTCGCTGTCGCCAGGTTGGCCGGCTAAGGCAAAGGCACTGCCCATGCCCGCTATCTGATGGGTCGCCAGGGTGCCGGAACGCAGGCCCTGCTCATGGCC > 5:25699/1‑149 GCCAGCAGGCCTGTGCGCAGGCGTCTTGCCAGTTGCTCAAGGCGCTGGTGCTCGCTGTCGCCAGGTTGGCCGGCCAAGGCAAAGGCACTGCCCATGCCCGCTATCTGATGGGTCGCCAGGGTGCCGGAACGCAGGCCCTGCTCATGGCC > 8:22124/1‑149 CAGCAGGCCTGTGCGCAGGCGTCTTGCCAGTTGCTCAAGGCGCTGGTGCTCGCTGTCGCCAGGTTGGCCGGCCAAGGCAAAGGCACTGCCCATGCCCGCTATCTGATGGGTCGCCAGGGTGCCGGAACGCAGGCCCTGCTCATGG < 4:331099/145‑1 CAGCAGGCCTGTGCGCAGGCGTCTTGCCAGTTGCTCAAGGCGCTGGTGCTCGCTGTCGCCAGGTTGGCCGGCCAAGGCAAAGGCACTGCCCATGCCCGCTATCTGATGGGTCGCCAGGGTGCCGGAACGCAGGCCCTGCTCATGG > 3:331099/1‑145 CTGTGCGCAGGCGTCTTGCCAGTTGCTCAAGGCGCTGGTGCTCGCTGTCGCCAGGTTGGCCGGCCAAGGCAAAGGCACTGCCCATGCCCGCTATCTGATGGGTCGCCAGGGTGCCGGAACGCAGGCCCTGCTCATGGCCGCGCGCTCGC > 8:31297/1‑149 GCAGGCGTCTTGCCAGTTGCTCAAGGTGCTGGTGCTCGCTGTCGCCAGGTTGGCCGGCCAAGGCAAAGGCACTGCCCATGCCCGCTATCTGATGGGTCGCCAGGGTGCCGGAACGCAGGCCCTGCTCATGG < 5:350223/131‑1 GCAGGCGTCTTGCCAGTTGCTCAAGGGGCTGGTGCTCGCTGTCGCCAGGTTGGCCGGCCAAGGCAAAGGCACTGCCCATGCCCGCTATCTGATGGGTCGCCAGGGTGCCGGAACGCAGGCCCTGCTCATGG > 6:350223/1‑131 TGCTCGCTGTCGCCAGGTTGGCCGGCCAAGGCAAAGGCACTGCCCATGCCCGCTATCTGATGGGTCGCCAGGGTGCCGGAACGCAGGCCCTGCTCATGGCCGCGCGCTCGCGTGCTGATGCGTGCGCAGATGCACGGCGGCGGCCATGA < 7:31297/149‑1 GCAAAGGCACTGCCCGTGCCCGCTATCTGATGGGTCGCCAGGGTGCCGGAACGCAGGCCCTGCTCATGGCCGCGCGCTCGCGTGCTGATGCGTGCGCAGATGCACGGCGGCGGCCATG < 3:44640/118‑1 GCAAAGGCACTGCCCGTGCCCGCTATCTGATGGGTCGCCAGGGTGCCGGAACGCAGGCCCTGCTCATGGCCGCGCGCTCGCGTGCTGATGCGTGCGCAGATGCACGGCGGCGGCCATG > 4:44640/1‑118 GGCCGCGCGCTCGCGTGCTGATGCGTGCGCAGATGCACGGCGGCGGCCATGAGCAGGGCCTGCGTTCCGGCACCCTGGCGCCCCATCAGATAGCGGGCATGGGCAGTGCCTTTGCCTTGGCCGGCCAACCTGGCGACAGCGAGCACCAG > 7:317676/1‑149 GGCCGCGCGCTCGCGTGCTGATGCGTGCGCAGATGCACGGCGGCGGCCATGAGCAGGGCCTGCGTTCCGGCACCCTGGCGACCCATCAGATAGCGGGCATGGGCAGTGCCTTTGCCTTGGCCGGCCA < 5:124348/127‑1 GGCCGCGCGCTCGCGTGCTGATGCGTGCGCAGATGCACGGCGGCGGCCATGAGCAGGGCCTGCGTTCCGGCACCCTGGCGACCCATCAGATAGCGGGCATGGGCAGTGCCTTTGCCTTGGCCGGCCA > 6:124348/1‑127 GCGCGCTCGCGTGCTGATGCGTGCGCAGATGCACGGCGGCGGCCATGAGCAGGGCCTGCGTTCCGGCACCCTGGCGACCCATCAGATAGCGGGCATGGGCAGTGCCTTTGCCTTGGCCGGCCAACCTGGCGACAGCGAGCACCAGCGCC > 1:348622/1‑149 ATGGCCAGCAGGCCTGTGCGCAGGCGTCTTGCCAGTTGCTCAAGGCGCTGGTGCTCGCTGTCGCCAGGTTGGCCGGCCAAGGCAAAGGCACTGCCCATGCCCGCTATCTGATGGGTCGCCAGGGTGCCGGAACGCAGGCCCTGCTCATGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2781452‑2781605‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcGCGCTCGCGTGCTGATGCGTGCGCAGATGCACGGCGGCGGCCATGAGCAGGGCCTGCGTTCCGGCACCCTGGCGACCCATCAGATAGCGGGCATGGGCAGTGCCTTTGCCTTGGCCGGCCAACCTGGCGACAGCGAGCACCAGCGCC < NC_002947/2781641‑2781495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |