| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2867028 = | 56 (0.950) | 3 (0.050) | 3/246 | NT | 5.4% | intergenic (‑252/‑1317) | glllA/PP_2520 | gallate dioxygenase/hypothetical protein |
| ? | NC_002947 | 2867091 = | 52 (0.920) | intergenic (‑315/‑1254) | glllA/PP_2520 | gallate dioxygenase/hypothetical protein | |||||
ACCGGGTCATCGCCATCGCCTACGCCCTCGGCGGCCTGTGCATCGTCTCACTGGGCGCCCTGAGCCTGGAGTCGAGCCTGCTGGTGGTGGGCGTGGCGGCTGCCGGGTTCTGCATGAGCGGTGCGCAGACCGCGCCTGAACGCCTTCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2867178‑2867028‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccACCACCAGCAGGCTCGACTCCAGGCTCAGGGCGCCCAGTGAGACGATGCACAGGCCGCCGAGGGCGTAGGCGATGGCGATGACCC > NC_002947/2867091‑2867175 ACCGGGTCATCGCCATCGCCTACGCCCTCGGCGGCCTGTGCATCGTCTCACTGGGCGCCCTGAGCCTGGAGTCGAGCCTGCTGGTGGTGGGCGTGGCGGCTGCCGGGTTCTGCATGAGCGGTGCGCAGACCGCGCCTGAACGCCTTCGC > 3:369615/1‑149ACCGGGTCATCGCCATCGCCTACGCCCTCGGCGGCCTGTGCATCGTCTCACTGGGCGCCCTGAGCCTGGAGTCGAGCCTGCTGGTGGTGGGCGTGGCGGCTGCCGGGTTCTGCATGAGCGGTGCGCAGACCGCGCCTGAACGCCTTCGC < 6:318848/149‑1 CCGGGTCATCGCCATCGCCTACGCCCTCGGCGGCCTGTGCATCGTCTCACTGGGCGCCCTGAGCCTGGAGTCGAGCCTGCTGGTGGTGGGCGTGGCGGCTGCCGGGTTCTGCATGAGCGGTGCGCAGACCGCGCCTGAACGCCTTCGCC > 2:358881/1‑149 CTGCTGGTGGTGGGCGTGGCGGCTGCCGGGTTCTGCATGAGCGGTGCGCAGACCGCGCCTGAACGCCTTCGCCCACCACCAGCAGGCTCGACTCCAGGCTCAGGGCGCCCAGTGAGACGATGCACAGGCCGCCGAGGGCGTAGGCGATG < 5:68085/149‑1 CTGCTGGTGGTGGGCGTGGCGGCTGCCGGGTTCTGCATGAGCGGTGCGCAGACCGCGCCTGAACGCCTTCGCCCACCACCAGCAGGCTCGACTCCAGGCTCAGGGCGCCCAGTGAGACGATGCACAGGCCGCCGAGGGCGTAGGCGATG > 6:68085/1‑149 TGGGCGTGGCGGCTGCCGGGTTCTGCATGAGCGGTGCGCAGACCGCGCCTGAACGCCTTCGCCCACCACCAGCAGGCTCGACTCCAGGCTCAGGGCGCCCAGTGAGACGATGCACAGGCCGCCGAGGGCGTAGGCGATGGCGATGACCC > 1:18793/1‑149 ACCGGGTCATCGCCATCGCCTACGCCCTCGGCGGCCTGTGCATCGTCTCACTGGGCGCCCTGAGCCTGGAGTCGAGCCTGCTGGTGGTGGGCGTGGCGGCTGCCGGGTTCTGCATGAGCGGTGCGCAGACCGCGCCTGAACGCCTTCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2867178‑2867028‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccACCACCAGCAGGCTCGACTCCAGGCTCAGGGCGCCCAGTGAGACGATGCACAGGCCGCCGAGGGCGTAGGCGATGGCGATGACCC > NC_002947/2867091‑2867175 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |