New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2966096	59 (1.000)	4 (0.070)	4/242	NT	6.3%	coding (531/1758 nt)	PP_2595	ABC transporter permease/ATP‑binding protein
	?	NC_002947	= 2966130	64 (1.150)					coding (497/1758 nt)	PP_2595	ABC transporter permease/ATP‑binding protein

GCTGCTGCGCTGGCGCTCCAGGCTTTGCGCCAGCAACCGTGTGCCCCCACCCTCCCCATTGAAGGCCCGCAGCACCGACTGTGCCTGGGCGAACTCCACCATACGCTGGCTGGCGGCGGCGAAGTGCTGGTGAAAGGCGTGATCGGCCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2965943‑2966096 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgcTGGCTGCAGTGCTGCTGTTCAGCGCACGCCTGGGGCGCCGGGCCGATCACGCCTTTCACCAGCACTTCGCCGCCGCCAGCCAGCGTATGGTGGAGTTCGCCCAGGCACAGTCGGTGCTGCGGGCCTTCAATGGGGAGGGTGGGGGC  <  NC_002947/2966130‑2965985                                                                                                                                                                                                                                                                                                              GCTGCTGCGCTGGCGCTCCAGGCTTTGCGCCAGCAACCGTGTGCCCCCACCCTCCCCATTGAAGGCCCGCAGCACCGACTGTGCCTGGGCGAACTCCACCATACGCTGGCTGGCGGCGGCGAAGTGCTGGTGAAAGGCGTGATCGGCCC                                                                                                                                                         <  2:90874/149‑1  CTGCTGCGCTGGCGCTCCAGGCTTTGCGCCAGCAACCGTGTGCCCCCACCCTCCCCATTGAAGGCCCGCAGCACCGACTGTGCCTGGGCGAACTCCACCATACGCTGGCTGGCGGCGGCGAAGTGCTGGTGAAAGGCGTGATCGGCCCG                                                                                                                                                        <  5:223813/149‑1                               CAGCAACCGCGTGCCCCCACCCTCCCCATTGAAGGCCCGCAGCACCGACTGTGCCTGGGCGAACTCCACCATACGCTGGCTGGCGGCGGCGAAGTGCTGGTGAAAGGCGTGATCGGCCCGGCGCTGGCTGCAGTGCTGCTGTTCAGCGC                                                                                                                           >  5:336748/1‑149                                                CACCCTCCCCATTGAAGGCCCGCAGCACCGACTGTGCCTGGGCGAACTCCACCATACGCTGGCTGGCGGCGGCGAAGTGCTGGTGAAAGGCGTGATCGGCCCGGCGCTGGCTGCAGTGCTGCTGTTCAGCGCACGCCTGGGGCGCCGGG                                                                                                          <  6:336748/149‑1                                                                          ACCGACTGTGCCTGGGCGAACTCCACCATACGCTGGCTGGCGGCGGCGAAGTGCTGGTGAAAGGCGTGATCGGCCCGGCGCTGGCTGCAGTGCTGCTGTTCAGCGCACGCCTGGGGCGCCGG                                                                                                           >  5:92798/1‑122                                                                          ACCGACTGTGCCTGGGCGAACTCCACCATACGCTGGCTGGCGGCGGCGAAGTGCTGGTGAAAGGCGTGATCGGCCCGGCGCTGGCTGCAGTGCTGCTGTTCAGCGCACGCCTGGGGCGCCGG                                                                                                           <  6:92798/122‑1                                                                                                                                                      GGCGCTGGCTGCAGTGCTGCTGTTCAGCGCACGCCTGGGGCGCCGGGCCGATCACGCCTTTCACCAGCACTTCGCCGCCGCCAGCCAGCGTATGGTGGAGTTCGCCCAGGCACAGTCGGTGCTGCGGGCCTTCAATGGGGAGGGTGGGG    >  2:40025/1‑149                                                                                                                                                      GGCGCTGGCTGCAGTGCTGCTGTTCAGCGCACGCCTGGGGCGCCGGGCCGATCACGCCTTTCACCAGCACTTCGCCGCCGCCAGCCAGCGTATGGTGGAGTTCGCCCAGGCACAGTCGGTGCTGCGGGCCTTCAATGGGGAGGGTGGGG    <  5:123257/149‑1                                                                                                                                                       GCGCTGGCTGCAGTGCTGCTGTTCAGCGCACGCCTGGGGCGCCGGGCCGATCACGCCTTTCACCAGCACTTCGCCGCCGCCAGCCAGCGTATGGTGGAGTTCGCCCAGGCACAGTCGGTGCTGCGGGCCTTCAATGGGGAGGGTGGGGG   >  4:342343/1‑149                                                                                                                                                        CGCTGGCTGCAGTGCTGCTGTTCAGCGCACGCCTGGGGCGCCGGGCCGATCACGCCTTTCACCAGCACTTCGCCGCCGCCAGCCAGCGTATGGTGGAGTTCGCCCAGGCACAGTCGGTGCTGCGGGCCTTCAATGGGGAGGGTGGGGGC  <  7:350424/149‑1                                                                                                                                                                                                                                                                                                              GCTGCTGCGCTGGCGCTCCAGGCTTTGCGCCAGCAACCGTGTGCCCCCACCCTCCCCATTGAAGGCCCGCAGCACCGACTGTGCCTGGGCGAACTCCACCATACGCTGGCTGGCGGCGGCGAAGTGCTGGTGAAAGGCGTGATCGGCCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2965943‑2966096 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgcTGGCTGCAGTGCTGCTGTTCAGCGCACGCCTGGGGCGCCGGGCCGATCACGCCTTTCACCAGCACTTCGCCGCCGCCAGCCAGCGTATGGTGGAGTTCGCCCAGGCACAGTCGGTGCTGCGGGCCTTCAATGGGGAGGGTGGGGGC  <  NC_002947/2966130‑2965985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.