| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2987370 = | NA (NA) | 4 (0.070) | 4/246 | NT | NA | coding (1029/2991 nt) | PP_2612 | membrane protein |
| ? | NC_002947 | 2987422 = | NA (NA) | coding (977/2991 nt) | PP_2612 | membrane protein | |||||
AGCCCGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCGGAACTGGCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2987522‑2987370‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccAGTTCCGGCGAAGGGGCATCCGCCGGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGC > NC_002947/2987422‑2987568 AGCCCGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCGGAACTGGCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCC > 2:357397/1‑149AGCCCGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCGGAACTGGCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCC > 4:266717/1‑149 GCCCGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCGGAACTGGCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCCG < 2:57968/149‑1 CCCGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCAGATGCCCCTTCGCCGGAACTGGCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCCGG < 2:240820/149‑1 CCGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCGGAACTGGCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCCGGC > 4:263719/1‑149 CGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCGGAACTGGCCGCGTTCAGGCTGGGCACGTCACGCCGTGGTCACCCCCTGTCGCCGcac > 6:266623/1‑146 CGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCGGAACTGGCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCCGGCC < 2:649/149‑1 CGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCGGAACTGGCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCCGGCC < 5:175894/149‑1 CATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCGGAACTGGCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCCGGCC > 3:213212/1‑129 CATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCGGAACTGGCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCCGGCC < 4:213212/129‑1 CTGTACCCGGCGGATGCCCCTTCGCCGGAACTGGCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCCGGC > 7:327185/1‑83 CTGTACCCGGCGGATGCCCCTTCGCCGGAACTGGCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCCGGC < 8:327185/83‑1 AACTGGCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCCGGCCAGTTCCGGCGAAGGGGCATCCGCCGGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTC > 8:61791/1‑149 TGGCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCCGGCCAGTTCCGGCGAAGGGGCATCCGCCGGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGC > 3:141907/1‑149 GCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCCGGCCAGTTCCGGCGAAGGGGCATCCGCCGGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGGTGCGATGGTGAAAGTCGCGGCTCTGCGG > 5:43353/1‑149 TCACGCCGGGGGCCCGCCCTGTCGCCGGCCAGTTCCGGCGAAGGGGCATCCGCCGGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAG < 4:141907/149‑1 GCCAGTTCCGGCGAAGGGGCATCCGCCGGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTG > 8:269837/1‑149 CCAGTTCCGGCGAAGGGGCATCCGCCGGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGC > 5:141031/1‑149 AGCCCGCAGAGCCGCGACTTTCACCATCGCAACCTGGTCGCCATGTTGCTGAACAAGACGCTGGAAAGCCTGTACCCGGCGGATGCCCCTTCGCCGGAACTGGCCGCGTTCAGGCTGGGCACGTCACGCCGGGGGCCCGCCCTGTCGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2987522‑2987370‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccAGTTCCGGCGAAGGGGCATCCGCCGGGTACAGGCTTTCCAGCGTCTTGTTCAGCAACATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGC > NC_002947/2987422‑2987568 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |