| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2987862 | NA (NA) | 5 (0.090) | 5/244 | NT | NA | coding (537/2991 nt) | PP_2612 | membrane protein |
| ? | NC_002947 | = 2987888 | NA (NA) | coding (511/2991 nt) | PP_2612 | membrane protein | |||||
TTTCGGCTGGGTCCAGGGGTAGTGCCGGGCGATGGCATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGG‑TTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTGGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2987709‑2987862‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaacCAGGCGCCGTCCACCCAGCCCCATGTGTTGCCAGTGAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTGACCTGGAGCAGCGACCCGGTCACCGAAACCTTGCCCATCGGCAACCTCCAT < NC_002947/2987888‑2987745 TTTCGGCTGGGTCCAGGGGTAGTGCCGGGCGATGGCATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGG‑TTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTG > 2:186269/1‑149TTTCGGCTGGGTCCAGGGGTAGTGCCGGGCGATGGCATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGG‑TTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTG > 2:65319/1‑149TTTCGGCTGGGTCCAGGGGTAGTGCCGGGCGATGGCATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCCCTCGG‑TTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTG > 3:310277/1‑149 TCGGCTGGGTCCAGGGGTAGTGCCGGGCGATGGCATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGGCTTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTG < 1:72933/148‑1 GAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGGCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGG‑TTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTGGCAACCAGGCGCCGTCCACCCAGCCCCATGTGTTGCCA < 1:99614/148‑1 CAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGG‑TTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTGGCAACCAGGCGCCGTCCACCCAGCCCCATGTGTTGC < 5:202853/131‑1 CAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGG‑TTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTGGCAACCAGGCGCCGTCCACCCAGCCCCATGTGTTGC > 6:202853/1‑131 CTGCTCCAGGTCAGCGGCATGCGCCGCTCGG‑TTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTGGCAACCAGGCGCCGTCCACCCAGCCCCATGTGTTGCCAGTGAGT > 3:40031/1‑117 CTGCTCCAGGTCAGCGGCATGCGCCGCTCGG‑TTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTGGCAACCAGGCGCCGTCCACCCAGCCCCATGTGTTGCCAGTGAGT < 4:40031/117‑1 GCAACCAGGCGCCGTCCACCCAGCCCCATGTGTTGCCAGTGAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTGACCTGGAGCAGCGACCCGGTCACCGAAACCTTGCCCATCGGCAACCTCCAT > 3:121829/1‑149 GCAACCAGGCGCCGTCCACCCAGCCCCATGTGTTGCCAGTGAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTGACCTGGAGCAGCGACCCGGTCACCGAAACCTTGCCCATCGGCAACCTCCAT < 7:61637/149‑1 CCAGGCGCCGTCCACCCAGCCCCATGTGTTGCCAGTGAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTGACCTGGAGCAGCGACC < 7:98753/110‑1 CCAGGCGCCGTCCACCCAGCCCCATGTGTTGCCAGTGAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTGACCTGGAGCAGCGACC > 8:98753/1‑110 TTTCGGCTGGGTCCAGGGGTAGTGCCGGGCGATGGCATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGG‑TTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTGGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2987709‑2987862‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaacCAGGCGCCGTCCACCCAGCCCCATGTGTTGCCAGTGAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTGACCTGGAGCAGCGACCCGGTCACCGAAACCTTGCCCATCGGCAACCTCCAT < NC_002947/2987888‑2987745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |