| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3369661 = | 60 (1.020) | 5 (0.090) | 5/246 | NT | 7.9% | coding (2967/3015 nt) | PP_2964 | transposase |
| ? | NC_002947 | 3369692 = | 59 (1.040) | coding (2998/3015 nt) | PP_2964 | transposase | |||||
GGTGTCGAAGCTGGCTCGCAGCTTGTCCAGTGCTACACCATCCACTTCTCCGTAGGGTGTGACTCGAAAAGTCGCGGGAGGGATCTCGATCATGTTGCCTCCTAGGCACCGGTCTTGCTGGCCGTGTTGGCTCGAAGCGAGCCG‑‑GCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3369810‑3369661‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccAGCAAGACCGGTGCCTAGGAGGCAACATGATCGAGATCCCTCCCGCGACTTTTCGAGTCACACCCTACGGAGAAGTGGATGGTGTAGCACTGGACAAGCTGCGAGCCAGCTTCGACACCTCCCAGCTTCTGCGACTGGTTGACCAATT > NC_002947/3369692‑3369839 GGTGGCGAAGCTGGCTCGCAGCTTGTCCAGTGCTACACCATCCACTTCTCCGTAGGGTGTGACTCGAAAAGTCGCGGGAGGGATCTCGATCATGTTGCCTCCTAGGCACCGGTCTTGCTGGCCGTGTTGGCTCGAAGCGAGCCG‑‑GCGGC < 7:87677/149‑1 GCTACACCATCCACTTCTCCGTAGGGTGTGACTCGAAAAGTCGCGGGAGGGATCTCGATCATGTTGCCTCCTAGGCACCGGTCTTGCTGGCCGTGTTGGCTCGAAGCGAGCCG‑‑GCGGC < 5:288253/118‑1 GCTACACCATCCACTTCTCCGTAGGGTGTGACTCGAAAAGTCGCGGGAGGGATCTCGATCATGTTGCCTCCTAGGAACCGGTCTTGCTGGCCGTGTTGGCTCGAAGCGAGCCG‑‑GCGGC > 6:288253/1‑118 TGCTGGCCGTGTTGGCTCGAAGCGAGCCG‑‑GCGGCCAGCAAGACCGGTGCCTAGGAGGCAACATGATCGAGATCCCTCCCGCGACTTTTCGAGTCACACCCTACGGAGAAGTGGATGGTGTAGCACTGGACAAGCTGCGAGCCAGCTTC > 7:338988/1‑148 GCTGGCCGTGTTGGCTCGAAGCGAGCCG‑‑GCGGCCAGCAAGACCGGTGCCTAGGAGGCAACATGATCGAGATCCCTCCCGCGACTTTTC > 3:267458/1‑88 GCTGGCCGTGTTGGCTCGAAGCGAGCCG‑‑GCGGCCAGCAAGACCGGTGCCTAGGAGGCAACATGATCGAGATCCCTCCCGCGACTTTTC < 4:267458/88‑1 GCCGTGTTGGCTCGAAGCGAGCCG‑‑GCGGCCAGCAAGACCGGTGCCTAGGAGGCAACATGATCGAGATCCCTCCCGCGACTTTTCGAGTCACACCCTACGGAGAAGTGGATGGTGTAGCACTGGACAAGCTGCGAGCCAGCTTCGACACC > 1:182219/1‑149 GTTGGCTCGAAGCGAGCCGACACGGCCAGCAAGACCGGTGCCTAGGAGGCAACATGATCTAGATCCCTCCCGCGACTTTTCGAGTCACACCCTACGTAGAAGTGGATGGTGTAGCACTGGACAAGCTGCGAGCCAGCTTCGACCCCTCC > 2:219338/1‑149 CCAGCAAGACCGGTGCCTAGGAGGCAACATGATCGAGATCCCTCCCGCGACTTTTCGAGTCACACCCTACGGAGAAGTGGATGGTGTAGCACTGGACAAGCTGCGAGCCAGCTTCGACACCTCCCAGCTTCTGCGACTGGTTGACCAAT > 5:185658/1‑149 CAGCAAGACCGGTGCCTAGGAGGCAACATGATCGAGATCCCTCCCGCGACTTTTCGAGTCACACCCTACGGAGAAGTGGATGGTGTAGCACTGGACAAGCTGCGAGCCAGCTTCGACACCTCCCAGCTTCTGCGACTGGTTGACCAATT > 7:144683/1‑149 CAGCAAGACCGGTGCCTAGGAGGCAACATGATCGAGATCCCTCCCGCGACTTTTCGAGTCACACCCTACGGAGAAGTGGATGGTGTAGCACTGGACAAGCTGCGAGCCAGCTTCGACACCTCCCAGCTTCTGCGACTGGTTGACCAATT < 7:78459/149‑1 GGTGTCGAAGCTGGCTCGCAGCTTGTCCAGTGCTACACCATCCACTTCTCCGTAGGGTGTGACTCGAAAAGTCGCGGGAGGGATCTCGATCATGTTGCCTCCTAGGCACCGGTCTTGCTGGCCGTGTTGGCTCGAAGCGAGCCG‑‑GCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3369810‑3369661‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccAGCAAGACCGGTGCCTAGGAGGCAACATGATCGAGATCCCTCCCGCGACTTTTCGAGTCACACCCTACGGAGAAGTGGATGGTGTAGCACTGGACAAGCTGCGAGCCAGCTTCGACACCTCCCAGCTTCTGCGACTGGTTGACCAATT > NC_002947/3369692‑3369839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |