| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3459850 | 63 (1.070) | 4 (0.070) | 4/244 | NT | 6.7% | coding (512/1446 nt) | PP_3075 | transcriptional regulator |
| ? | NC_002947 | = 3459877 | 52 (0.920) | coding (485/1446 nt) | PP_3075 | transcriptional regulator | |||||
CGTGAATGGCGTGGGCCAGCAGCTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAACACGGGCGAATCACTGCCGGCGCCACGCCGGGCGCGTCGTTTGGCTTCCAGGCTGGGCGCGCTGCTGCCGACGAACTGGGCGAAGCTGTATTTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3459698‑3459850‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcctCGACCCGCTCGCAACTGCGCGCCCGCCAGGCCAAATACAGCTTCGCCCAGTTCGTCGGCAGCAGCGCGCCCAGCCTGGAAGCCAAACGACGCGCCCGGCGTGGCGCCGGCAGTGATTCGCCCGTGTTGCTGCTGGGCGAAACCGGTAC < NC_002947/3459877‑3459730 CGTGAATGGCGTGGGCCAGCAGCTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAACACGGGCGAATCACTGCCGGCGCCACGCCGGGCGCGTCGTTTGGCTTCCAGGCTGGGCGCGCTGCTGCCGACGAACTGGGCGAAGCTGTATTT < 4:350789/148‑1CGTGAATGGCGTGGGCCAGCAGCTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAACACGGGCGAATCACTGCCGGCGCCACGCCGGGCGCGTCGTTTGGCTTCCAGGCTGGGCGCGCTGCTGCCGACGAACTGGGCGAAGCTGTATTT < 5:67538/148‑1 CGCCCAGCAGCAACACGGGCGAATCACTGCCGGCGCCACGCCGGGCGCGTCGTTTGGCTTCCAGGCTGGGCGCGCTGCTGCCGACGAACTGGGCGAAGCTGTATTTGGCCTCGACCCGCTCGCAACTGCGCGCCCGCCAGGCCAAATA > 3:6920/1‑148 GCCCAGCAGCAACACGGGCGAATCACTGCCGGCGCCACGCCGGGCGCGTCGTTTGGCTTCCAGGCTGGGCGCGCTGCTGCCGACGAACTGGGCGAAGCTGTATTTGGCCTCGACCCGCTCGCAACTGCGCGCCCGCCAGGCCAAATACA < 4:6920/149‑1 GCCCAGCAGCAACACGGGCGAATCACTGCCGGCGCCACGCCGGGCGCGTCGTTTGGCTTCCAGGCTGGGCGCGCTGCTGCCGACGAACTGGGCGAAGCTGTATTTGGCCTCGACCCGCTCGCAACTGCGCGCCCGCCAGGCCAAATAC > 3:235876/1‑148 GCCCAGCAGCAACACGGGCGAATCACTGCCGGCGCCACGCCGGGCGCGTCGTTTGGCTTCCAGGCTGGGCGCGCTGCTGCCGACGAACTGGGCGAAGCTGTATTTGGCCTCGACCCGCTCGCAACTGCGCGCCCGCCAGGCCAAATAC < 4:235876/148‑1 GCCTCGACCCGCTCGCAACTGCGCGCCCGCCAGGCCAAATACAGCTTCGCCCAGTTCGTCGGCAGCAGCGCGCCCAGCCTGGAAGCCAAACGACGCGCCCGGCGTGGCGCCGGCAGTGATTCGCCCGTGTTGCTGCTGGGCGCAACCGG > 3:266634/1‑149 TCGACCCGCTCGCAACTGCGCGCCCGCCAGGCCAAATACAGCTTCGCCCAGTTCGTCGGCAGCAGCGCGCCCAGCCTGGAAGCCAAACGACGCGCCCGGCGTGGCGCCGGCAGTGATTCGCCCGTGTTGCTGCTGGGCGAAACCGGTAC > 3:275080/1‑149 TCGACCCGCTCGCAACTGCGCGCCCGCCAGGCCAAATACAGCTTCGCCCAGTTCGTCGGCAGCAGCGCGCCCAGCCTGGAAGCCAAACGACGCGCCCGGCGTGGCGCCGGCAGTGATTCGCCCGTGTTGCTGCTGGGCGAAACCGGTAC > 7:330292/1‑149 CGTGAATGGCGTGGGCCAGCAGCTCCTTGCCGGTACCGGTTTCGCCCAGCAGCAACACGGGCGAATCACTGCCGGCGCCACGCCGGGCGCGTCGTTTGGCTTCCAGGCTGGGCGCGCTGCTGCCGACGAACTGGGCGAAGCTGTATTTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3459698‑3459850‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcctCGACCCGCTCGCAACTGCGCGCCCGCCAGGCCAAATACAGCTTCGCCCAGTTCGTCGGCAGCAGCGCGCCCAGCCTGGAAGCCAAACGACGCGCCCGGCGTGGCGCCGGCAGTGATTCGCCCGTGTTGCTGCTGGGCGAAACCGGTAC < NC_002947/3459877‑3459730 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |