New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 358811634 (0.580)5 (0.100) 5/216 NT 13.2% intergenic (+37/‑38) catA‑II/benE‑II catechol 1,2‑dioxygenase/benzoate transport protein
?NC_002947 = 3588144 37 (0.740)intergenic (+65/‑10) catA‑II/benE‑II catechol 1,2‑dioxygenase/benzoate transport protein

GGGAGGTGGTGTTCGTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3587949‑3588116
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcatgcccgctccAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCCACTCGGTGGATCAGGCCTCCTGCAAAGCTCGCGGCCGCCCGCTGCGCTGCTCATCGGCACCGCCCTGGGCCTGCTGCAACTGGAAGTCGAA  <  NC_002947/3588144‑3587999
                                                                                                                                                                                                                                                                                                                          
GGGAGGTGGTGTTCGTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTT                                                                                                                                                                       <  7:105321/149‑1
      TGGTGTTCGTCGAAGGGCCAGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGG                                                                                                                                                                 <  5:67314/149‑1
       GGTGTTCGTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTACATCAGGCCCAGGGAGGTGCCGATGAGCATCGCAGCGGGCGGCAGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCTCGGG                                                                                                                                                                >  3:227022/1‑149
           TTCGTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGTGCTTTGCAGAAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATG                                                                                                                                                            >  8:255233/1‑149
           TTCGTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATG                                                                                                                                                            <  5:73434/149‑1
             CGTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGC                                                                                                                                                           <  5:257173/148‑1
              GTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCC                                                                                                                                                         >  5:270193/1‑149
                 GAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCG                                                                                                                                                                  >  3:198728/1‑137
                 GAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCG                                                                                                                                                                  <  4:198728/137‑1
                                                    CGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAG                                                                                                                    <  6:159740/148‑1
                                                                  AGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATG                                                                                                            <  3:239338/142‑1
                                                                  AGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATG                                                                                                            >  4:239338/1‑142
                                                                    CAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCAT                                                                                                             <  1:55820/139‑1
                                                                    CAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCAT                                                                                                             >  2:55820/1‑139
                                                                                                                                                    TTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCCACTCGGTGGATCAGGCCTCCTGCAAAGCTCGCGGCCGCCCGCTGCGCTGCTCATCGGCACCGCCCTGGGCCTGC                   >  6:296310/1‑149
                                                                                                                                                     TCGCGTTCATGCCCGCTCCAACAACGACGGCAGACTCGTCACCTGGGGTCGCGGGAAGGCCCGCGAAACAGCCCACTCGGTGGATCAGGCCTCCTGCAAAGCTCGCGGCCGCCCGCTGCGCTGCTCATCGGCACCGCCCTGGGCCTGC                   <  8:333752/148‑1
                                                                                                                                                       GCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCCACTCGGTGGATCAGGCCTCCTGCAAAGCTCGCGGCCCCCCGCTGCGCTGCTAATCGGCACCGCCCTGGGCCTGCTc                 >  6:259091/1‑147
                                                                                                                                                        CGGGCATGCCCTCTACAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCAAATCGGTGGATCAGGCCTCCTGCAAAGCTCGCGGCCGCCAGCTGCGCTGCTCATCGGAACCGCCCTTGGCCTGCTGC                >  4:227022/1‑148
                                                                                                                                                            CATGCCCGCTCCAACACCGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCCACTCGGTGGATCAGGCCTCCTGCAAAGCTCGCGGCCGCCCGCTGCGCTGCTCATCGGCACCGCCCTGCGCCTGCTGCAACTG           >  1:261159/1‑149
                                                                                                                                                            CATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCCACTCGGTGGATCAGGCCTCCTGCAAAGCTCGCGGCCGCCCGCTGCGCTGCTCATCGGCACCGCCCTGGGCCTGCTGCAACTG           <  6:385635/149‑1
                                                                                                                                                                CCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCCACTCGGTGGATCAGGCCTCCTGCAAAGCTCGCGGCCGCCCGCTGCGCTGCTCATCGGCACCGCCCTGGGCCTGCTGCAACTGGAA        <  1:280668/148‑1
                                                                                                                                                                  CGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCCACTCGGTGGATCAGGCCTCCTGCAAAGCTCGCGGCCGCCCGCTGCGCTGCTCATCGGCACCGCCCTGGGCCTGCTGCAACTGGAAGTC     >  5:131833/1‑149
                                                                                                                                                                   GCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCCACTCGGTGGATCAGGCCTCCTGCAAAGCTCGCGGCCGCCCGCTGCGCTGCTCATCGGCACCGCCCTGGGCCTGCTGCAACTGGAAGTC     >  7:190563/1‑148
                                                                                                                                                                     gaCAACAACGAGTGCACAGGTTGCACCGGTGGCGGGGGGTTGGCCCGCGAAACAGCCCACTCGGTGGATCAGGCCTCCTGCAAAGCTCGCGGCCGCCCGCTGCGCTGCTCATCGGCACCGCCCTGGGCCTGCTGCAACTGGAAGTCGAA  <  5:259091/147‑1
                                                                                                                                                                       CAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCCACTCGGTGGATCAGGCCTCCTGCAAAGCTCGCGGCCGCCCGCTGCGC                                              >  4:16397/1‑103
                                                                                                                                                                       CAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCCACTCGGTGGATCAGGCCTCCTGCAAAGCTCGCGGCCGCCCGCTGCGC                                              <  3:16397/103‑1
                                                                                                                                                                                                                                                                                                                          
GGGAGGTGGTGTTCGTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3587949‑3588116
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcatgcccgctccAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCCACTCGGTGGATCAGGCCTCCTGCAAAGCTCGCGGCCGCCCGCTGCGCTGCTCATCGGCACCGCCCTGGGCCTGCTGCAACTGGAAGTCGAA  <  NC_002947/3588144‑3587999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.