New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3638865	58 (0.980)	3 (0.050)	3/246	NT	5.2%	coding (861/993 nt)	PP_3205	fumarylacetoacetate hydrolase family protein
	?	NC_002947	= 3638934	54 (0.950)					coding (930/993 nt)	PP_3205	fumarylacetoacetate hydrolase family protein

ATGCACTTCGGTTTCCACCAGTTGATTGCCCATGCGGCGCTGACGCGACGCTTGAGTGCGGGCACGCTACTGGGCTCCGGCACCGTGTCCAACGCCGAGCGCAGCGTGGGCTCGGCGTGCATCGCCGAGCGCCGCGCCATCGAAACCATCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3638713‑3638865 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccCTCGGGCCCGCGAGCCTCCATGCGCACCCGGTCGCCAAAGCGCATGAAGGCCGTGCGTGGCGCACCGCAGGCGATGGTTT  <  NC_002947/3638934‑3638855                                                                                                                                                                                                                                           ATGCACTTCGGTTTCCACCAGTTGATTGCCCATGCGGCGCTGACGCGACGCTTGAGTGCGGGCACGCTACTGGGCTCCGGCACCGTGTCCAACGCCGAGCGCAGCGTGGGCTCGGCGTGCATCGCCGAGCGCCGCGCCATCGAAACCAT                                                                                      >  3:175924/1‑149  TGCACTTCGGTTTCCACCAGTTGATTGCCCATGCGGCGCTGACGCGACGCTTGAGTGCGGGCACGCTACTGGGCTCCGGCACCGTGTCCAACGCCGAGCGCAGCGTGGGCTCGGCGTGCATCGCCGAGCGCCGCGCCATCGAAACCATC                                                                                     >  3:237423/1‑149                                                                                     GTGTCCAACGCCGAGCGCAGCGTGGGCTCGGCGTGCATCGCCGAGCGCCGCGCCATCGAAACCATCGCCCTCGGGCCCGCGAGCCTCCATGCGCACCCGGTCGCCAAAGCGCATGAAGGCCGTGCGTGGCGCACCGCAGGCGATGGTTT  <  8:80997/149‑1                                                                                           AACGCCGAGCGCAGCGTGGGCTCGGCGTGCATCGCCGAGCGCCGCGCCATCGAAACCATCGCCCTCGGGCCCGCGAGCCTCCATGCGCACCCGGTCGCCAAAGCGCATGAAGGCCGTGCGTGGCGCACCGCAGGCGAT       <  3:340424/138‑1                                                                                           AACGCCGAGCGCAGCGTGGGCTCGGCGTGCATCGCCGAGCGCCGCGCCATCGAAACCATCGCCCTCGGGCCCGCGAGCCTCCATGCGCACCCGGTCGCCAAAGCGCATGAAGGCCGTGCGTGGCGCACCGCAGGCGAT       >  4:340424/1‑138                                                                                                                                                                                                                                           ATGCACTTCGGTTTCCACCAGTTGATTGCCCATGCGGCGCTGACGCGACGCTTGAGTGCGGGCACGCTACTGGGCTCCGGCACCGTGTCCAACGCCGAGCGCAGCGTGGGCTCGGCGTGCATCGCCGAGCGCCGCGCCATCGAAACCATCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3638713‑3638865 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccCTCGGGCCCGCGAGCCTCCATGCGCACCCGGTCGCCAAAGCGCATGAAGGCCGTGCGTGGCGCACCGCAGGCGATGGTTT  <  NC_002947/3638934‑3638855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.