| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3718681 | 61 (1.030) | 4 (0.070) | 4/238 | NT | 6.5% | coding (720/774 nt) | paaF | enoyl‑CoA hydratase/isomerase |
| ? | NC_002947 | = 3718709 | 58 (1.060) | coding (692/774 nt) | paaF | enoyl‑CoA hydratase/isomerase | |||||
TCGGGGCGGTTCAATGAAAGGAAGGCAACGCCGTCCTCGATGGAAAACAGGATGTGCTGGAAAGTCATGACAGACTCGCTCCGTCAGTCGAGAGAATGAAGTTCAGCGCCCTTGGAAGCGGGCCTGGCGCTTTTCCTGGAAGGCGCGGATGCCTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3718525‑3718681‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccttcaCCCTGCTGGCGGGCACCGCCGACCGCGATGAAGGCATCCGCGCCTTCCAGGAAAAGCGCCAGGCCCGCTTCCAAGGGCGCTGAACTTCATTCTCTCGACTGACGGAGCGAGTCTGTCATGACTTTCCAGCACATCCTGTTTTCCATC < NC_002947/3718709‑3718563 TCGGGGCGGTTCAATGAAAGGAAGGCAACGCCGTCCTCGATGGAAAACAGGATGTGCTGGAAAGTCATGACAGACTCGCTCCGTCAGTCGAGAGAATGAAGTTCAGCGCCCTTGGAAGCGGGCCTGGCGCTTTTCCTGGAAGGCGCGGA > 8:144524/1‑149 CGGGGCGGTGCAATGCAAGGAAGGCAACGCCGTCCTCGATGGAAAACAGGATGTGCTGGAAAGTCATGACAGACTCGCTCCGTCAGTCGAGAGAATGAAGTTCAGCGCCCTTGGAAGCGGGCCTGGCGCTTTTCCTGGAAGGCGCGGAT < 2:173895/149‑1 GGGGCGGTTCAATGAAAGGAAGGCAACGCCGTCCTCGATGGAAAACAGGATGTGCTGGAAAGTCATGACAGACTCGCTCCGTCAGTCGAGAGAATGAAGTTCAGCGCCCTTGGAAGCGGGCCTGGCGCTTTTCCTGGAAGGCGCGGA < 7:144524/147‑1 TCGAGAGAATGAAGTTCAGCGCCCTTGGAAGCGGGCCTGGCGCTTTTCCTGGAAGGCGCGGATGCCTTCACCCTGCTGGCGGGCACCGCCGACCGCGATGAAGGCAT < 1:306121/107‑1 TCGAGAGAATGAAGTTCAGCGCCCTTGGAAGCGGGCCTGGCGCTTTTCCTGGAAGGCGCGGATGCCTTCACCCTGCTGGCGGGCACCGCCGACCGCGATGAAGGCAT > 2:306121/1‑107 TTCAGCGCCCTTGGAAGCGGGCCTGGCGCTTTTCCTGGAAGGCGCGGATGCCTTCACCCTGCTGGCGGGCACCGCCGACCGCGATGAAGGCATC < 5:224045/94‑1 TTCAGCGCCCTTGGAAGCGGGCCTGGCGCTTTTCCTGGAAGGCGCGGATGCCTTCACCCTGCTGGCGGGCACCGCCGACCGCGATGAAGGCATC > 6:224045/1‑94 CTTCACCCTGCTGGCGGGCACCGCCGACCGCGATGAAGGCATCCGCGCCTTCCAGGAAAAGCGCCAGGCCCGCTTCCAAGGGCGCTGAACTTCATTCTCTCGACTGACGGAGCGAGTCTGTCATGACTTTCCAGCACATCCTGTTTTC > 2:57710/1‑148 ACCCTGCTGGCGGGCACCGCCGACCGCGATGAAGTCATCCTCGCCTTCCAGGAAAAGCGCCAGGCCCGCTTCCAAGGGCGCTGAACTTCATTCTCTCGACTCAAGGAGCGAGTCTGTCATGACTTTCCAGCACATCCTGTATACCATC > 6:215708/1‑148 ACCCTGCTGGCGGGCACCGCCGACCGCGATGAAGGCATCCGCGCCTTCCAGGAAAAGCGCCAGGCCCGCTTCCAAGGGCGCTGAACTTCATTCTCTCGACTGACGGAGCGAGTCTGTCATGACTTTCCAGCACATCCTGTTTTCCATC > 3:331683/1‑148 ACCCTGCTGGCGGGCACCGCCGACCGCGATGAAGGCATCCGCGCCTTCCAGGAAAAGCGCCAGGCCCGCTTCCAAGGGCGCTGAACTTCATTCTCTCGACTGACGGAGCGAGTCTGTCATGACTTTCCAGCACATCCTGTTTTCCATC < 4:17350/148‑1 TCGGGGCGGTTCAATGAAAGGAAGGCAACGCCGTCCTCGATGGAAAACAGGATGTGCTGGAAAGTCATGACAGACTCGCTCCGTCAGTCGAGAGAATGAAGTTCAGCGCCCTTGGAAGCGGGCCTGGCGCTTTTCCTGGAAGGCGCGGATGCCTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3718525‑3718681‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccttcaCCCTGCTGGCGGGCACCGCCGACCGCGATGAAGGCATCCGCGCCTTCCAGGAAAAGCGCCAGGCCCGCTTCCAAGGGCGCTGAACTTCATTCTCTCGACTGACGGAGCGAGTCTGTCATGACTTTCCAGCACATCCTGTTTTCCATC < NC_002947/3718709‑3718563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |