| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3769837 = | 76 (1.290) | 4 (0.070) | 3/244 | NT | 5.7% | coding (1424/2187 nt) | PP_3330 | ferric siderophore receptor |
| ? | NC_002947 | 3769879 = | 61 (1.080) | coding (1466/2187 nt) | PP_3330 | ferric siderophore receptor | |||||
GTCGCCGACCTGGCTGATCGAGGCGCTGGTCAGGGTACCGCCTGGTGGTTCGGCCGAGTTGCTGTATTGGGTGTACAGGGTGACGTTGGAGGTCAGGTCATAGACCAGGCCCAGGCGACCGGTGATGGCGTCCCAGCGTCGGTCGAGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3769988‑3769837‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggGCCTGGTCTATGACCTGACCTCCAACGTCACCCTGTACACCCAATACAGCAACTCGGCCGAACCACCAGGCGGTACCCTGACCAGCGCCTCGATCAGCCAGGTCGGCGACTTCGACCTGA > NC_002947/3769879‑3769998 GTCGCAGCCCTGGCTGATCGAGGCGCTGGTCAGGGTACCGCCTGGTGGTTCGGCCGAGTTGCTGTATTGGGTGTACAGGGTGACGTTGGAGGTCAGGTCATAGACCAGGCCCAGGAGACCGGGGATGGCGTCCCAGCGTCGGTCGAGC > 8:45024/1‑148 TCGCCGACCTGGCTGATCGAGGCGCTGGTCAGGGTACCGCCTGGTGGTTCGGCCGAGTTGCTGTATTGGGTGTACAGGGTGACGTTGGAGGTCAGGTCATAGACCAGGCCCAGGCGACCGGTGATGGCGTCCCAGCGTCGGTCGAGCCT > 3:53712/1‑149 GCCGACCTGGCTGATCGAGGCGCTGGTCAGGGTACCGCCTGGTGGTTCGGCCGAGTTGCTGTATTGGGTGTACAGGGTGACGTTGGAGGTCAGGTCATAGACCAGGCCCAGGCGACCGGTGATGGCGTCCCAGCGTCGGTCGAGCCTGG < 8:153113/149‑1 CCCAGGCGACCGGTGATGGCGTCCCAGCGTCGGTCGAGCCTGGGCCTGGTCTATGACCTGACCTCCAACGTCACCCTGTACACCCAATACAGCAACTCGGCCGAACCACCAGGCGGTACCCTGACCAGCGCCTCGATCAGCCAGGTCGG > 2:12076/1‑149 CCCAGGCGACCGGTGATGGCGTCCCAGCGTCGGTCGAGCCTGGGCCTGGTCTATGACCTGACCTCCAACGTCACCCTGTACACCCAATACAGCAACTCGGCCGAACCACCAGGCGGTACCCTGACCAGCGCCTCGA < 5:48994/136‑1 CCCAGGCGACCGGTGATGGCGTCCCAGCGTCGGTCGAGCCTGGGCCTGGTCTATGACCTGACCTCCAACGTCACCCTGTACACCCAATACAGCAACTCGGCCGAACCACCAGGCGGTACCCTGACCAGCGCCTCGA > 6:48994/1‑136 CGACCGGTGATGGCGTCCCAGCGTCGGTCGAGCCTGGGCCTGGTCTATGACCTGACCTCCAACGTCACCCTGTACACCCAATACAGCAACTCGGCCGAACCACCAGGCGGTACCCTGACCAGCGCCTCGATCAGCCAGGTCGGCGACTT < 1:12076/149‑1 GGCCTGGTCTATGACCTGACCTCCAACGTCACCCTGTACACCCAATACAGCAACTCGGCCGAACCACCAGGCGGTACCCTGACCAGCGCCTCGATCAGCCAGGTCGGCGACTTCGACCTGA < 1:322606/121‑1 GGCCTGGTCTATGACCTGACCTCCAACGTCACCCTGTACACCCAATACAGCAACTCGGCCGAACCACCAGGCGGTACCCTGACCAGCGCCTCGATCAGCCAGGTCGGCGACTTCGACCTGA > 2:322606/1‑121 GTCGCCGACCTGGCTGATCGAGGCGCTGGTCAGGGTACCGCCTGGTGGTTCGGCCGAGTTGCTGTATTGGGTGTACAGGGTGACGTTGGAGGTCAGGTCATAGACCAGGCCCAGGCGACCGGTGATGGCGTCCCAGCGTCGGTCGAGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3769988‑3769837‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggGCCTGGTCTATGACCTGACCTCCAACGTCACCCTGTACACCCAATACAGCAACTCGGCCGAACCACCAGGCGGTACCCTGACCAGCGCCTCGATCAGCCAGGTCGGCGACTTCGACCTGA > NC_002947/3769879‑3769998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |