New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3916591	53 (0.900)	9 (0.160)	6/242	NT	15.6%	coding (373/3129 nt)	mexB	multidrug resistance protein MexB
	?	NC_002947	= 3916622	47 (0.840)					coding (404/3129 nt)	mexB	multidrug resistance protein MexB

CAACCTGCTGTACTTCGAGTCGCAGAGCAGCCTGGGCAGCGCCACCATCACCGCCACCTTCGCCCCGGGTACCCACCC‑GGACCTGGCCCAGGTCGACGTGCAGAACCGCCTGAAAGTGGTCGAGTCGCGCCTGCCGCGCCCGGTCACC‑‑CAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3916437‑3916591 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaggAAGCCGGTGGACACTTTCTCCACCTGCAGGCCCTGCTGGGTGACCGGGCGCGGCAGGCGCGACTCGACCACTTTCAGGCGGTTCTGCACGTCGACCTGGGCCAGGTCCGGGTGGGTACCCGGGGCGAAGGTGGCGGTGATGGTG  <  NC_002947/3916622‑3916479                                                                                                                                                                                                                                                                                                                CAACCTGCTGTACTTCGAGTCGCAGAGCAGCCTGGGCAGCGCCACCATCACCGCCACCTTCGCCCCGGGTACCCACCC‑GGACCTGGCCCAGGTCGACGTGCAGAACCGCCTGAAAGTGGTCGAGTCGCGCCTGCCGCGCCCGGTCACC‑‑C                                                                                                                                                        <  5:227552/149‑1        CTGTACTTCGAGTCGCAGAGCAGCCTGGGCAGCGCCACCATCACCGCCACCTTCGCCCCGGGTACCCACCC‑GGACCTGGCCCAGGTCGACGTGTAGAACCGCCTGAAAGTGGTCGAGTCGCGCCTGCCGCGCCCGGTCACC‑‑CAGCAG                                                                                                                                                   <  1:214099/147‑1              TTCGAGTCGCAGAGCAGCCTGGGCAGCGCCACCATCACCGCCACCTTCGCCCCGGGTACCCACCC‑GGACCTGGCCCAGGTCGACGTGCAGAACCGCCTGAAAGTGGTCGAGTCGCGCCTGCCGCGCCCGGTCACC‑‑CAGCAGGAAGCCGG                                                                                                                                           >  3:243518/1‑149                            CAGCCTGGGCAGCGCCACCATCACCGCCACCTTCGCCCCGGGTACCCACCCGGGACCTGGCCCAGGTCGACGTGCAGAACCGCCTGAAAGTGGTCCAGTCGCCCCTGCCGCGCCCGGTCACC‑‑CAGCAGGAAGCCCGTGGACACATTCTC                                                                                                                              >  1:93947/1‑149                                              CATCACCGCCACCTTCGGCCCGGGTACCCACCC‑AGACCTGGCCCAGGTCGACGTGCAGAACCGCCTGAAAGTGGTCGAGTCGCGCCTGCGGCGCCCGGTCACC‑‑CAGCAGGAAGCCGGTGGACACTTTCTCCACCTGCAGGCCCTGCTGG                                                                                                           <  5:305973/149‑1                                              CATCACCGCCACCTTCGCCCCGGGTACCCACCC‑GGACCTGGCCCAGGTCGACGTGCAGAACCGCCTGAAAGTGGTCGAGTCGCGCCTGCCGCGCCCGGTCACC‑‑CAGCAGGAAGCCGGTGGACACTTTCTCCACCTGCAGGCCCTGCTGG                                                                                                           <  2:93947/149‑1                                              CATCACCGCCACCTTCGCCCCGGGTACCCACCC‑GGACCTGGCCCAGGTCGACGTGCAGAACCGCCTGAAAGTGGTCGAGTCGCGCCTGCCGCGCCCGGTCACC‑‑CAGCAGGAAGCCGGTGGACACTTTCTCCACCTGCAGGCCCTGCTGG                                                                                                           <  4:243518/149‑1                                                TCACCGCCACCTTCGCCCCGGGTACCCACCC‑GGACCTGGCCCAGGTCGACGTGCAGAACCGCCTGAAAGTGGTCGAGTCGCGCCTGCCGCGCCCGGTCGCCAACCGCAGGAAGCCGGTGGGCACATTATCCCCCAGCAGGCCCGGCGGG                                                                                                           >  2:157944/1‑149                                                TCACCGCCACCTTCGCCCCGGGTACCCACCC‑GGACCTGGCCCAGGTCGACGTGCAGAACCGCCTGAAAGTGGTCGAGTCGCGCCTGCCGCGCCCGGTCACC‑‑CAGCAGGAAGCCGGTGGACACTTTCTCCACCTGCAGGCCCTGCTG                                                                                                            >  5:363202/1‑146                                                TCACCGCCACCTTCGCCCCGGGTACCCACCC‑GGACCTGGCCCAGGTCGACGTGCAGAACCGCCTGAAAGTGGTCGAGTCGCGCCTGCCGCGCCCGGTCACC‑‑CAGCAGGAAGCCGGTGGACACTTTCTCCACCTGCAGGCCCTGCTG                                                                                                            <  6:363202/146‑1                                                              GCCCCGGGTACCCACCC‑GGACCTGGCCCAGGTCGACGTGCAGAACCGCCTGAAAGTGGTCGAGTCGCGCCTGCCGCGCCCGGTCGCCAACAGCAGGAAGCCGGTGGACACTTTCTCCACCTGCAGGCCCTGCTGGGTGACCGGGCGCGG                                                                                             <  1:157944/149‑1                                                                                                                                                         AGCAGGAAGCCGGTGGACACTTTCTCCACCTGCAGGCCCTGCTGGGTGACCGGGCGCGGCAGGCGCGACTCGACCACTTTCAGGCGGTTCTGCACGTCGACCTGGGCCAGGTCCGGGTCGGTACCCGGGGCGAAGGTGGCGGTGATGGT   >  7:214665/1‑149                                                                                                                                                          GCAGGAAGCCGGTGGACACTTTCTCCACCTGCAGGCCCTGCTGGGTGACCGGGCGCGGCAGGCGCGACTCGACCACTTTCAGGCGGTTCTGCACGTCGACCTGGGCCAGGTCCGGGTGGGTACCCGGGGCGAAGGTGGCGGTGATGGTG  <  5:211278/149‑1                                                                                                                                                           CAGGAAGCCGGTGGACACTTTCTCCACCTGCAGGCCCTGCTGGGTGACCGGGCGCGGCAGGCGCGACTCGACCACTTTCAGGCGGTTCTGCACGTCG                                                     <  3:256180/97‑1                                                                                                                                                           CAGGAAGCCGGTGGACACTTTCTCCACCTGCAGGCCCTGCTGGGTGACCGGGCGCGGCAGGCGCGACTCGACCACTTTCAGGCGGTTCTGCACGTCG                                                     >  4:256180/1‑97                                                                                                                                                                                                                                                                                                                CAACCTGCTGTACTTCGAGTCGCAGAGCAGCCTGGGCAGCGCCACCATCACCGCCACCTTCGCCCCGGGTACCCACCC‑GGACCTGGCCCAGGTCGACGTGCAGAACCGCCTGAAAGTGGTCGAGTCGCGCCTGCCGCGCCCGGTCACC‑‑CAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3916437‑3916591 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaggAAGCCGGTGGACACTTTCTCCACCTGCAGGCCCTGCTGGGTGACCGGGCGCGGCAGGCGCGACTCGACCACTTTCAGGCGGTTCTGCACGTCGACCTGGGCCAGGTCCGGGTGGGTACCCGGGGCGAAGGTGGCGGTGATGGTG  <  NC_002947/3916622‑3916479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.