New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3924360 | 56 (0.950) | 4 (0.070) | 4/242 | NT | 6.7% | coding (454/1431 nt) | peaB | quinohemoprotein amine dehydrogenase modification protein |
? | NC_002947 | = 3924375 | 59 (1.060) | coding (439/1431 nt) | peaB | quinohemoprotein amine dehydrogenase modification protein |
TTCGGTCAGCAAGGTAGCGTTGGTGGTCATGATGAACTCCACCTGCTTGCCCGCCTCGGCGAACCGCCGCTCGCAGTAAGCCACCATGTGCTCGATCAACGGCCGGTTGGACAGCGGTTCGCCACCGAAGAACACCACGCTGTAGCGCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3924208‑3924360 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgctcAAGGAATCACCCAACGAGCAGCGCTACAGCGTGGTGTTCTTCGGTGGCGAACCGCTGTCCAACCGGCCGTTGATCGAGCACATGGTGGCTTACTGCGAGCGGCGGTTCGCCGAGGCGGGCAAGCAGGTGGAGTTCATCATGACCAC < NC_002947/3924375‑3924230 TTCGGTCAGCAAGGTAGCGTTGGTGGTCATGATGAACTCCACCTGCTTGCCCGCCTCGGCGAACCGCCGCTCGCAGTAAGCCACCATGTGCTCGATCAACGGCCGGTTGGACAGCGGTTCGCCACCGAAGAACACCACGCTGTAGCGCT > 6:55726/1‑149 CGGTCAGCAAGGTAGCGTTGGTGGTCATGATGAACTCCACCTGCTTGCCCGCCTCGGCGAACCGCCGCTCGCAGTAAGCCACCATGTGCTCGATCAACGGCCGGTTGGACAGCGGTTCGCCACCGAAGAACACCACGCTGTAGCGCTG < 4:98849/148‑1 CAAGGTAGCGTTGGTGGTCATGATGAACTCCACCTGCTTGCCCGCCTCGGCGAACCGCCGCTCGCAGTAAGCCACCATGTGCTCGATCAACGGCCGGTTGGACAGCGGTTCGTCACCGAAGAACACCACGCTGTAGCGCTGCTC < 3:142489/144‑1 CAAGGTAGCGTTGGTGGTCATGATGAACTCCACCTGCTTGCCCGCCTCGGCGAACCGCCGCTCGCAGTAAGCCACCATGTGCTCGATCAACGGCCGGTTGGACAGCGGTTCGTCACCGAAGAACACCACGCTGTAGCGCTGCTC > 4:142489/1‑144 ATGATGAACTCCACCTGCTTGCCCGCCTCGGCGAACCGCCGCTCGCAGTAAGCCACCATGTGCTCGATCAACGGCCGGTTGGACAGCGGTTCGCCACCGAAGAACACCACGCTGTAGCGCTGCTCAAGGAATCACCCAACGAGCAGCGC < 5:139691/149‑1 CTCGCAGTAAGCCACCATGTGCTCGATCAACGGCCGGTTGGACAGCGGTTCGCCACCGAAGAACACCACGCTGTAGCGCTGCTCAAGGAATCACCCAACGAGCAGCGCT > 7:33885/1‑109 CTCGCAGTAAGCCACCATGTGCTCGATCAACGGCCGGTTGGACAGCGGTTCGCCACCGAAGAACACCACGCTGTAGCGCTGCTCAAGGAATCACCCAACGAGCAGCGCT < 8:33885/109‑1 CTCGATCAACGGCCGGTTGGACAGCGGTTCGCCACCGAAGAACACCACGCTGTAGCGCTGCTCAAGGAATCACCCAACGAGCAGC < 6:197710/85‑1 CTGCTCAAGGAATCACCCAACGAGCAGCGCTACAGCGTGGTGTTCTTCGGTGGCGAACCGCTGTCCAACCGGCCGTTGATCGAGCACATGGTGGCTTACTGCGAGCGGCAGTTCGCCGAGGCGGGCAAGCAGGTGGAGTTCATCATGAC < 4:105650/149‑1 TCAAGGAATCACCCAACGAGCAGCGCTACAGCGTGGTGTTCTTCGGTGGCGAACCGCTGTCCAACCGGCCGTTGATCGAGCACATGGTGGCTTACTGCGAGCGGCGGTTCGCCGAGGCGGGCAAGCAGGTGGAGTACATCATGACCAC > 1:329606/1‑148 TTCGGTCAGCAAGGTAGCGTTGGTGGTCATGATGAACTCCACCTGCTTGCCCGCCTCGGCGAACCGCCGCTCGCAGTAAGCCACCATGTGCTCGATCAACGGCCGGTTGGACAGCGGTTCGCCACCGAAGAACACCACGCTGTAGCGCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3924208‑3924360 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgctcAAGGAATCACCCAACGAGCAGCGCTACAGCGTGGTGTTCTTCGGTGGCGAACCGCTGTCCAACCGGCCGTTGATCGAGCACATGGTGGCTTACTGCGAGCGGCGGTTCGCCGAGGCGGGCAAGCAGGTGGAGTTCATCATGACCAC < NC_002947/3924375‑3924230 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |