New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4094749	56 (0.950)	7 (0.120)	6/246	NT	12.1%	coding (735/765 nt)	PP_3603	GntR family transcriptional regulator
	?	NC_002947	= 4094783	48 (0.850)					coding (701/765 nt)	PP_3603	GntR family transcriptional regulator

CAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4094599‑4094749 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgcACCTGAGCAACAGCCGCGAGCGCTTGCGCCAGGCGCATGAGGCGGCTGAAGCGCAAGGAACCTGAAGCCTTTGCTGCCTGTACTGGCCTCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAGGCCAGTACAGTC  <  NC_002947/4094783‑4094636                                                                                                                                                                                                                                                                                                             CAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCAT                                                                                                                                                        <  4:347623/149‑1                   GGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCA                                                                                                                                                         >  1:210991/1‑130                   GGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCA                                                                                                                                                         <  2:210991/130‑1                     CGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGC                                                                                                                                                      <  1:223893/131‑1                     CGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGC                                                                                                                                                      >  2:223893/1‑131                                           TACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCACCTGAGCAACAGCCGCGAGCGCTTGCGCCAGGCGCAT                                                                                                                <  5:229079/147‑1                                                   TTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCACCTGAGCAACAGCCGCGAGCGCTTGCGCCAGGCGCATGAGGC                                                                                                           <  1:195538/144‑1                                                   TTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCACCTGAGCAACAGCCGCGAGCGCTTGCGCCAGGCGCATGAGGC                                                                                                           >  2:195538/1‑144                                                                  CCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCACCTGAGCAACAGCCGCGAGCGCTTGCGCCAGGCGCATGAGGCG                                                                                                          >  7:189841/1‑130                                                                  CCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGCACCTGAGCAACAGCCGCGAGCGCTTGCGCCAGGCGCATGAGGCG                                                                                                          <  8:189841/130‑1                                                                                                                                  TTGCGCTTCAGCCGCCTCATGCACCTGAGCAACAGCCGCGAGCGCTTGCGCCAGGCGCAT                                                                                                                <  1:323981/60‑1                                                                                                                                  TTGCGCTTCAGCCGCCTCATGCACCTGAGCAACAGCCGCGAGCGCTTGCGCCAGGCGCAT                                                                                                                >  2:323981/1‑60                                                                                                                                                   CATGCACCTGAGCAACAGCCGCGAGCGCTTGCGCCAGGCGCATGAGGCGGCTGAAGCGCAAGGAACCTGAAGCCTTTGCTGCCTGTACTGGCCTCTTCGCGGGCAAGATAGCCCTGTCGAAGCGG                              >  7:75650/1‑125                                                                                                                                                   CATGCACCTGAGCAACAGCCGCGAGCGCTTGCGCCAGGCGCATGAGGCGGCTGAAGCGCAAGGAACCTGAAGCCTTTGCTGCCTGTACTGGCCTCTTCGCGGGCAAGATAGCCCTGTCGAAGCGG                              <  8:75650/125‑1                                                                                                                                                       CACCTGAGCAACAGCCGCGAGCGCTTGCGCCAGGCGCATGAGGCGGCTGAAGCGCAAGGAACCTGAAGCCTTTGCTGCCTGTACTGGCCTCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAGGCCAGTACAGTC  <  1:339706/149‑1                                                                                                                                                       CACCTGAGCAACAGCCGCGAGCGCTTGCGCCAGGCGCATGAGGCGGCTGAAGCGCAAGGAACCTGAAGCCTATGCTGCCTGTACTGGCCTCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAGGCCAGTACAGTC  <  7:160519/149‑1                                                                                                                                                                                                                                                                                                             CAGGAAAGCCCTGCGCACGGCGGGGCTTTTCTTTTTTGACTGTACTGGCCTTTTCGCGGGCAAGCCCGCTTCGACAGGGCTATCTTGCCCGCGAAGAGGCCAGTACAGGCAGCAAAGGCTTCAGGTTCCTTGCGCTTCAGCCGCCTCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4094599‑4094749 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgcACCTGAGCAACAGCCGCGAGCGCTTGCGCCAGGCGCATGAGGCGGCTGAAGCGCAAGGAACCTGAAGCCTTTGCTGCCTGTACTGGCCTCTTCGCGGGCAAGATAGCCCTGTCGAAGCGGGCTTGCCCGCGAAAAGGCCAGTACAGTC  <  NC_002947/4094783‑4094636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.