| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4118007 = | 60 (1.020) | 4 (0.070) | 4/244 | NT | 6.9% | coding (697/2256 nt) | PP_3622 | isoquinoline 1‑oxidoreductase subunit beta |
| ? | NC_002947 | 4118079 = | 51 (0.910) | coding (769/2256 nt) | PP_3622 | isoquinoline 1‑oxidoreductase subunit beta | |||||
CGCCTGGCAGCTGATGCACAGAATGTACGCCTTTCATGGCCTTGATCTGGTCTTCGTTGCGCAGGCTGCCAACCGTCATGCCCAGGCGCGGTGCATGCTGCACGGCAGCGTGGAGCATGCCGTCGACCTTGATGTCGATGCAGTACTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4118157‑4118007‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggcATGACGGTTGGCAGCCTGCGCAACGAAGACCAGATCAAGGCCATGAAAGGCGTACATTCTGTGCATCAGCTGCCAGGCGCCGTGGCTGTGGTCGCCGAGCGCTGGTGGCACGCCAAGCGTGCAGTGGAGGCGATTCAGGTGGAC > NC_002947/4118079‑4118222 CGCCTGGCAGCTGATGCACAGAATGTACGCCTTTCATGGCCTTGATCTGGTCTTCGTTGCGCAGGCTGCCAACCGTCATGCCCAGGCGCGGTGCATGCTGCACGGCAGCGTGGAGCATGCCGTCGACCTTGATGTCGATGCAGTACTGG < 2:26127/149‑1 ACCGTCATGCCCAGGCGCGGTGCATGCTGCACGGCAGCGTGGAGCATGCCGTCGACCTTGATGTCGATGCAGTACTGGGCATGACGGTTGGCAGCCTGCGCAACGAAGACCAGATCAAGGCCATGAAAGGCGTACATTCTGTGCATCAG > 8:200214/1‑149 CCGTCATGCCCAGGCGCGGTGCATGCTGCACGGCAGCGTGGAGCATGCCGTCGACCTTGATGTCGATGCAGTACTGG > 5:263508/1‑77 CCGTCATGCCCAGGCGCGGTGCATGCTGCACGGCAGCGTGGAGCATGCCGTCGACCTTGATGTCGATGCAGTACTGG < 6:263508/77‑1 GTCATGCCCAGGCGCGGTGCATGCTGCACGGCAGCGTGGAGCATGCCGTCGACCTTGATGTCGATGCAGTACTGGGCATGACGGTTGGCAGCCTGCGCAACGAAGACCAGATCAAGGCCATGAAAGGCGTACATTCTGTGCATCAGCTG > 5:245597/1‑149 GCGGTGCATGCTGCACGGCAGCGTGGAGCATGCCGTCGACCTTGATGTCGATGCAGTACTGGCCATGACGGTTGGCAGCCTGCGCAACGAAGACCAGATCAAGGCCATGAAAGGCGTACATTCTGTGCATCAGCTGCCAGGCGCCGTGG < 7:200214/149‑1 GTGGAGCATGCCGTCGACCTTGATGTCGATGCAGTACTGGGCATGACGGTTGGCAGCCTGCGCAACGAAGACCAGATCAAGGCCATGAAAGGCGTACATTCTGTGCATCAGCTGCCAGGCGCCGTGGCTGTGGTCGCCGAGCGCTGGTG < 6:245597/149‑1 GGCATGACGGTTGGCAGCCTGCGCAACGAAGACCAGATCAAGGCCATGAAAGGCGTACATTCTGTGCATCAGCTGCCAGGCGCCGTGGCTGTGGTCGCCGAGCGCTGGTGGCACGCCAAGCGTGCAGTGGAGGCGATTCAGGTGGAC < 4:6179/147‑1 CGCCTGGCAGCTGATGCACAGAATGTACGCCTTTCATGGCCTTGATCTGGTCTTCGTTGCGCAGGCTGCCAACCGTCATGCCCAGGCGCGGTGCATGCTGCACGGCAGCGTGGAGCATGCCGTCGACCTTGATGTCGATGCAGTACTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4118157‑4118007‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggcATGACGGTTGGCAGCCTGCGCAACGAAGACCAGATCAAGGCCATGAAAGGCGTACATTCTGTGCATCAGCTGCCAGGCGCCGTGGCTGTGGTCGCCGAGCGCTGGTGGCACGCCAAGCGTGCAGTGGAGGCGATTCAGGTGGAC > NC_002947/4118079‑4118222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |