New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4173583 =	67 (1.130)	4 (0.070)	4/238	NT	6.2%	coding (196/573 nt)	PP_3672	hypothetical protein
	?	NC_002947	4173634 =	59 (1.070)					coding (145/573 nt)	PP_3672	hypothetical protein

CCAGGAGGCGGCCAGTTGGGACAGTGAGCAGACGGTGTCGGTCAACCTGTCGGCGGTGCAGTTCAAGAACGGCGATCTGGTGCATACCGTCGCCCTCGCGCTGGCCGACTCGGGCCTGCCGCCGCAGCGGCTGGAGCTGGAAATTACCGAGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4173737‑4173583 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagtcggCCAGCGCGAGGGCGACGGTATGCACCAGATCGCCGTTCTTGAACTGCACCGCCGACAGGTTGACCGACACCGTCTGCTCACTGTCCCAACTGGCCGCCTCCTGGCAGGCCAGGTTCAGCGCACGGTTGCCCAGCTCGTGGA  >  NC_002947/4173634‑4173774                                                                                                                                                                                                                                                                                                          CCAGGAGGCGGCCAGTTGGGACAGTGAGCAGACGGTGTCGGTCAACCTGTCGGCGGTGCAGTTCAAGAACGGCGCTCTGGTGCATACCGTCGCCCTCGCGCTGGCCGACTCGGGCCTGCCGCCGCAGCGGCTGGAGCTGGAAATTACC                                                                                                                                                      >  4:73848/1‑148    GGAGGCGGCCAGTTGGGACAGTGAGCAGACGGTGTCGGTCAACCTGTCGGCGGTGCAGTTCAAGAACGGCGATCTGGTGCATACCGTCGCCCTCGCGCTGGCCGACTCGGGCCTGCCGCCGCAGCGGCTGGAGCTGGAAATTACCGAGT                                                                                                                                                  >  8:236968/1‑149     GAGGCGGCCAGTTGGGACAGTGAGCAGACGGTGTCGGTCAACCTGTCGGCGGTGCAGTTCAAGAACGGCGATCTGGTGCATACCGTCGCCCTCGCGCTGGCCGACTCGGGCCTGCCGCCGCAGCGGCTGGAGCTGGAAATTACCGAGTC                                                                                                                                                 >  7:150907/1‑149     GAGGCGGCCAGTTGGGACAGTGAGCAGACGGTGTCGGTCAACCTGTCGGCGGTGCAGTTCAAGAACGGCGATCTGGTGCATACCGTCGCCCTCGCGCTGGCCGACTCGGGCCTGCCGCCGCAGCGGCTGGAGCTGGAAATTACCGAGT                                                                                                                                                  <  6:4683/148‑1      AGGCGGCCAGTTGGGACAGTGAGCAGACGGTGTCGGTCAACCTGTCGGCGGTGCAGTTCAAGAACGGCGATCTGGTGCATACCGTCGCCCTCGCGCTGGCCGACTCGGGCCTGCCGCCGCAGCGGCTGGAGCTGGAAATTACCGAGTCG                                                                                                                                                <  7:2873/149‑1      AGGCGGCCAGTTGGGACAGTGAGCAGACGGTGTCGGTCAACCTGTCGGCGGTACAGTTCAAGAACGGCGATCTGGTGCATACCGTCGCCCTCGCGCTGGCCGACTCGGGCCTGCCGCCGCAGCGGCTGGAGCTGGAAATTACCGAGTCG                                                                                                                                                <  6:289799/149‑1                                                                                                      TGGCCGACTCGGGCCTGCCGCCGCAGCGGCTGGAGCTGGAAATTACCGAGTCGGCCAGCGCGAGGGCGACGGTATGCACCAGATCGCCGTTCTTGAACTGCACCGCCGACAGGTTGACCGACACCGTCTGCTCACTGTCCCAACTGGCC                                                >  8:68780/1‑149                                                                                                       GGCCGACTCGGGCCTGCCGCCGCAGCGGCTGGAGCTGGAAATTACCGAGTCGGCCAGCGCGAGGGCGACGGTATGAACCAGATCGCCGTTCTTGAACTGCACCGCCGACAGGTTGACCGACACCGTCTGCTCACTGTCCCAACTGGCCG                                               >  4:228617/1‑149                                                                                                          CGACTCGGGCCTGCCGCCGCAGCGGCTGGAGCTGGAAATTACCGAGTCGGCCAGCGCGAGGGCGACGGTATGCACCAGATCGCCGTTCTTGAACTGCACCGCCGACAGGTTGACCGACACCGTCTGCTCACTGTCCCAACTGGCCGCCT                                            >  7:52388/1‑149                                                                                                                GGGCCTGCCGCCGCAGCGGCTGGAGCTGGAAATTACCGAGTCGGCCAGCGCGAGGGCGACGGTATGCACCAGATCGCCGTTCTTGAACTGCACCGCCGACAGGTTGACCGACACCGTCTGCTCACTGTCCCAACTGGCCGCCTCCTGG                                       <  3:228617/148‑1                                                                                                                                                   CCGAGTCGGCCAGCGCGAGGGCGACGGTATGCACCAGATCGCCGTTCTTGAACTGCACCGCCGACAGGTTGACCGACACCGTCTGCTCACTGTCCCAACTGGCCGCCTCCTGGCAGGCCAGGTTCAGCGCCCGGTTGCCCAGCTCGTG    >  5:88958/1‑148                                                                                                                                                   CCGAGTCGGCCAGCGCGAGGGCGACGGTATGCACCAGATCGCCGTTCTTGAACTGCACCGCCGACAGGTTGACCGACACCGTCTGCTCACTGTCCCAACTGGCCGCCTCCTGGCAGGCCAGGTTCAGCGCACGGTTGCCCAGCTCGTG    >  2:116113/1‑148                                                                                                                                                   CCGAGTCGGCCAGCGCGAGGGCGACGGTATGCACCAGATCGCCGTTCTTGAACTGCACCGCCGACAGGTTGACCGACACCGTCTGCTCACTGTCCCAACTGGCCGCCTCCTGGCAGGCCAGGTTCAGCGCACGGTTGCCCAG          >  2:204748/1‑142                                                                                                                                                   CCGAGTCGGCCAGCGCGAGGGCGACGGTATGCACCAGATCGCCGTTCTTGAACTGCACCGCCGACAGGTTGACCGACACCGTCTGCTCACTGTCCCAACTGGCCGCCTCCTGGCAGGCCAGGTTCAGCGCACGGTTGCCCAG          <  1:204748/142‑1                                                                                                                                                   CCGAGTCGGCCAGCGCGAGGGCGACGGTATGCACCAGATCGCCGTTCTTGAACTGCACCGCCGACAGGTTGACCGACACCGTCTGCTCACTGTCCCAACTGGCCGCCTCCTGGCAGGCC                                 <  1:119110/119‑1                                                                                                                                                   CCGAGTCGGCCAGCGCGAGGGCGACGGTATGCACCAGATCGCCGTTCTTGAACTGCACCGCCGACAGGTTGACCGACACCGTCTGCTCACTGTCCCAACTGGCCGCCTCCTGGCAGGCC                                 >  2:119110/1‑119                                                                                                                                                    CGAGTCGGCCAGCGCGAGGGCGACGGTATGCACCAGATCGCCGTTCTTGAACTGCACCGCCGACAGGTTGACCGACACCGTCTGCTCACTGTCCCAACTGGCCGCCTCCTGGCAGGCCAGGTTCAGCGCACGGTTGCCCAGCTCGTGGA  <  8:52388/149‑1                                                                                                                                                                                                                                                                                                          CCAGGAGGCGGCCAGTTGGGACAGTGAGCAGACGGTGTCGGTCAACCTGTCGGCGGTGCAGTTCAAGAACGGCGATCTGGTGCATACCGTCGCCCTCGCGCTGGCCGACTCGGGCCTGCCGCCGCAGCGGCTGGAGCTGGAAATTACCGAGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4173737‑4173583 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagtcggCCAGCGCGAGGGCGACGGTATGCACCAGATCGCCGTTCTTGAACTGCACCGCCGACAGGTTGACCGACACCGTCTGCTCACTGTCCCAACTGGCCGCCTCCTGGCAGGCCAGGTTCAGCGCACGGTTGCCCAGCTCGTGGA  >  NC_002947/4173634‑4173774

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.