| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4365977 | 60 (1.020) | 3 (0.050) | 3/240 | NT | 5.2% | coding (766/1098 nt) | PP_3842 | hypothetical protein |
| ? | NC_002947 | = 4365999 | 53 (0.960) | coding (788/1098 nt) | PP_3842 | hypothetical protein | |||||
AACCGCTTGCCGAACTCATTCGCAATCTGGCACAAGGCCGGTTCAAAGCCATTCCCGGCTCCGCCAGTCACTGGTTGCCATTGGTCAGCGTCGATTATCTGGTGAAAATGATAACTTGCGTGGCGTTCGACCCCTCCATGGCCAACCGGCAAGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4365822‑4365977‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagttcGGTGTTCGCTCATATAGCGCCAGAACTTGCCGGTTGGCCATGGAGGGGTCGAACGCCACGCAAGTTATCATTTTCACCAGATAATCGACGCTGACCAATGGCAACCAGTGACTGGCGGAGCCGGGAATGGCTTTGAACCGGC < NC_002947/4365999‑4365858 AACCGCTTGCCGAACTCATTCGCAATCTGGCACAAGGCCGGTTCAAAGCCATTCCCGGCTCCGCCAGTCACTGGTTGCCATTGGTCAGCGTCGATTATCTGGTGAAAATGATAACTTGCGTGGCGTTCGACCCCTCCATGGCCAACCGG > 5:160605/1‑149 CCGCTTGCCGAACTCATTCGCAATCTGGCACAAGGCCGGTTCAAAGCCATTCCCGGCTCCGCCAGTCACTGGTTGCCATTGGTCAGCGTCGATTATCTGGTGAAAATGATAACTTGCGTGGCGTTCGACCCCTCCATGGCCAACCGGC > 6:43021/1‑148 GCTTGCCGAACTCATTCGCAATCTGGCACAAGGCCGGTTCAAAGCCATTCCCGGCTCCGCCAGTCACTGGTTGCCATTGGTCAGCGTCGATTATCTGGTGAAAATGATAACTTGCGTGGCGTTCGACCCCTCCATGGCCAACCGGCAAG > 3:207135/1‑149 GTTCAAAGCCATTCCCGGCTCCGCCAGTCACTGGTTGCCATTGGTCAGCGTCGATTATCTGGTGAAAATGATAACTTGCGTGGCGTTCGACCCCTCCATGGCCAACCGGCAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGCCGG < 6:256172/149‑1 CATTGGTCAGCGTCGATTATCTGGTGAAAATGATAACTTGCGTGGCGTTCGACCCCTCCATGGCCAACCGGCAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGC > 3:132058/1‑108 CATTGGTCAGCGTCGATTATCTGGTGAAAATGATAACTTGCGTGGCGTTCGACCCCTCCATGGCCAACCGGCAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGC < 4:132058/108‑1 CAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGCCGGTTGGCCATGGAGGGGTCGAACGCCACGCAAGTTATCATTTTCACCAGATAATCGACGCTGACCAATGGCAACCAGTTACTGGCGGAGCCGGGAATG < 6:189880/136‑1 CAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGCCGGTTGGCCATGGAGGGGTCGAACGCCACGCAAGTTATCATTTTCACCAGATAATCGACGCTGACCAATGGCAACCAGTGACTGGCGGAGCCGGGAATGGCTTTGAACCGGC > 2:218349/1‑149 CAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGCCGGTTGGCCATGGAGGGGTCGAACGCCACGCAAGTTATCATTTTCACCAGATAATCGACGCTGACCAATGGCAACCAGTGACTGGCGGAGCCGGGAATGGCTTTGAACCGGC < 8:16854/149‑1 CAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGCCGGTTGGCCATGGAGGGGTCGAACGCCACGCAAGTTATCATTTTCACCAGATAATCGACGCTGACCAATGGCAACCAGTGACTGGCGGAGCCGGGAATGGCTTTGAACCGG < 3:312452/148‑1 CAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGCCGGTTGGCCATGGAGGGGTCGAACGCCACGCAAGTTATCATTTTCACCAGATAATCGACGCTGACCAATGGCAACCAGTAACTGGCGGAGCCGGGAATG > 5:189880/1‑136 AACCGCTTGCCGAACTCATTCGCAATCTGGCACAAGGCCGGTTCAAAGCCATTCCCGGCTCCGCCAGTCACTGGTTGCCATTGGTCAGCGTCGATTATCTGGTGAAAATGATAACTTGCGTGGCGTTCGACCCCTCCATGGCCAACCGGCAAGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4365822‑4365977‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagttcGGTGTTCGCTCATATAGCGCCAGAACTTGCCGGTTGGCCATGGAGGGGTCGAACGCCACGCAAGTTATCATTTTCACCAGATAATCGACGCTGACCAATGGCAACCAGTGACTGGCGGAGCCGGGAATGGCTTTGAACCGGC < NC_002947/4365999‑4365858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |