| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4403429 = | 68 (1.150) | 4 (0.070) | 4/242 | NT | 6.3% | coding (152/468 nt) | PP_3882 | terminase small subunit |
| ? | NC_002947 | 4403474 = | 55 (0.980) | coding (107/468 nt) | PP_3882 | terminase small subunit | |||||
AAATGGCCGGGAGACGACCCACACCGACGGAGCTGAAGCTTGTCAGAGGGAATCCCGGTAAGCGCCCGATCAACAAGAACGAGCCTCAGCCAGCTAAGCGCATTCCCAGCGCCCCCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4403582‑4403429‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggggcgCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGCTCTCAAAAAAAATCATTTCATTTCGCGGTTTTG > NC_002947/4403474‑4403620 AAATGGCCGGGAGACGACCCACACCGACGGAGCTGAAGCTTGTCAGAGGGAATCCCGGTAAGCGCCCGATCAACAAGAACGAGCCTCAGCCAGCTAAGCGCATTCCCAGCGCCCCCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGG > 2:197723/1‑149 TGGCCGGGAGACGACCCACACCGACGGAGCTGAAGCTTGTCAGAGGGAATCCCGGTAAGCGCCCGATCAACAAGAACGAGCCTCAGCCAGCTAAGCGCATTCCCAGCGCCCCCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGG < 3:345548/149‑1 GCCGGGAGACGACCCACACCGACGGAGCTGAAGCTTGTCAGAGGGAATCCCGGTAAGCGCCCGATCAACAAGAACGAGCCTCAGCCAGCTAAGCGCATTCCCAGCGCCCCCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGGCG > 1:19252/1‑149 GCCGGGAGACGACCCACACCGACGGAGCTGAAGCTTGTCAGAGGGAATCCCGGTAAGCGCCCGATCAACAAGAACGAGCCTCAGCCAGCTAAGCGCATTCCCAGCGCCCCCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGGCG < 8:38632/149‑1 CAGCGCCCCCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCC > 6:262363/1‑149 AGCGCCCCCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCG > 2:46863/1‑149 CCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTT > 3:368121/1‑149 TGGCCAGGTGGCGTGGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGCTCTCAAAAAAAATC < 1:46863/149‑1 GGGGGCGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGCTCTCAAAAAAAATCATTTCATTTCGCtg > 5:192281/1‑147 GCGCTGGGAATGCGCTTAGCTGGCTGAGGTTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGCTCTCAAAAAAAATCATTTCATTTCGCGGTTTT < 4:33974/149‑1 CGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGCTCTCAAAAAAAATCATTTCATTTCGCGGTTTTG > 2:161476/1‑149 CGCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGCTCTCAAAAAAAATCATTTCATTTCGCGGTTTTG < 5:121177/149‑1 AAATGGCCGGGAGACGACCCACACCGACGGAGCTGAAGCTTGTCAGAGGGAATCCCGGTAAGCGCCCGATCAACAAGAACGAGCCTCAGCCAGCTAAGCGCATTCCCAGCGCCCCCGACCACTTGAGCTCAGATGGCCAGGTGGCGTGGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4403582‑4403429‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggggcgCTGGGAATGCGCTTAGCTGGCTGAGGCTCGTTCTTGTTGATCGGGCGCTTACCGGGATTCCCTCTGACAAGCTTCAGCTCCGTCGGTGTGGGTCGTCTCCCGGCCATTTTTTGCTCTCAAAAAAAATCATTTCATTTCGCGGTTTTG > NC_002947/4403474‑4403620 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |