New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4578331 | 54 (0.910) | 4 (0.070) | 4/240 | NT | 7.2% | coding (1780/2211 nt) | glgB | 1,4‑alpha‑glucan branching enzyme |
? | NC_002947 | = 4578355 | 52 (0.940) | coding (1756/2211 nt) | glgB | 1,4‑alpha‑glucan branching enzyme |
GCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCCCACCAGGCGCTGCACGCCCTGGTGCTCGGGATACTGCAGCAGGTACCAGTCCAGTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4578178‑4578331 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agttcggcCAGTGGCGTGAGTGGAACCACGACGCCGAACTGGACT < NC_002947/4578355‑4578319 GCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCCCACCAGGCGCTGCACGCCCTGGTGCAGGGGATACTGCAGCAGCTACCAGTCCAtt > 8:260246/1‑147 GCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCCCACCAGGCGCTGCACGCCCTGGTGCTCGGGATACTGCAGCAGGTACCCGTCCAGTTC > 4:4263/1‑149 TCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCCCACCAGGCGCTGCACGCCCTGGTGCTCGGGATACTGCAGCAGGTACCAGTCCAGTTCGGC > 8:131770/1‑149 CACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCCCACCAGGCGCTGCACGCCCTGGTGCTCGGGATACTGCAGCAGGTACCAGTCCA > 7:306773/1‑127 CACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCCCACCAGGCGCTGCACGCCCTGGTGCTCGGGATACTGCAGCAGGTACCAGTCCA < 8:306773/127‑1 GGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCCCACCAGGCGCTGCACGCCCTGGTGCTCGGGATACTGCAGCAGGTACCAGTCCAGTTCGGCCAGTGGCGTGAGTGGAAC > 8:48798/1‑148 AATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCCCACCAGGCGCTGCACGCCCTGGTGCTCGGGATACTGCAGCAGGTACCAGTCCAGTTCGGCCAGTGGCGTGAGTGGAACCACGACGCCGAACTGGACT < 7:48798/149‑1 GCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCCCACCAGGCGCTGCACGCCCTGGTGCTCAGGATACTGCAGCAGGTACCAGTCCAGTTCGGCCAGTGGCGTGAGTGGAACCACGACGCCGAAC > 1:374231/1‑137 GCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCCCACCAGGCGCTGCACGCCCTGGTGCTCAGGATACTGCAGCAGGTACCAGTCCAGTTCGGCCAGTGGCGTGAGTGGAACCACGACGCCGAAC < 2:374231/137‑1 GCGCGTCGTCACCGATCAACCACTGGAAACCCTGCGGCTGGCAATCCTGCTCGTGCAACGCCGGCTCTTCGCGGTACAGGCGGTTGAGGTCGCCCACCAGGCGCTGCACGCCCTGGTGCTCGGGATACTGCAGCAGGTACCAGTCCAGTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4578178‑4578331 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agttcggcCAGTGGCGTGAGTGGAACCACGACGCCGAACTGGACT < NC_002947/4578355‑4578319 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |