New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4714542 =	57 (0.960)	3 (0.050)	3/242	NT	5.3%	coding (660/891 nt)	PP_4172	hypothetical protein
	?	NC_002947	4714565 =	54 (0.970)					coding (683/891 nt)	PP_4172	hypothetical protein

CACCTGCTGGTTGCCACTGACGCCGTAACGCACCGGGTACAGGCTGCGCGGCCAGCGCGTCGGCGGCTGGTCGAGCAACTGGTCGAGCACCCACAGCCAGTCGTCCTGGTCGCTGTAGGTACTGGCCAGGGCGCCGGC‑GCGAACGAAGCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4714695‑4714542 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcgCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCTGGCCGCGCAGCCTGTACCCGGTGCGTTACGGCGTCAGTGGCAACCAGCAGGTGGCCCGTGCCCTGGGTC  >  NC_002947/4714565‑4714711                                                                                                                                                                                                                                                                                                                CACCTGCTGGTTGCCACTGACGCCGTAACGCACCGGGTACAGGCTGCGCGGCCAGCGCGTCGGCGGCTGGTCGAGCAACTGGTCGAGCACCCACAGCCAGTCGTCCTGGTCGCTGTAGGTACTGGCCAGGGCGCCGGC‑GCGAACGAAGC                                                                                                                                                          <  3:29873/149‑1       CTGGTTGCCACTGACGCCGTAACGCACCGGGTACAGGCTGCGCGGCCAGCGCGTCGGCGGCTGGTCGAGCAACTGGTCGAGCACCCACAGCCAGTCGTCCTGGTCGCTGTAGGTACTGGCCAGGGCGCCGGC‑GCGAACGAAGCCGGCG                                                                                                                                                     <  8:94694/148‑1                         GTAACGCACCGGGTACAGGCTGCGCGGCCAGCGCGTCGGCGGCTGGTCGAGCAACTGGTCGAGCACCCACAGCCAGTCGTCCTGGTCGCTGTAGGTACTGGCCAGGGCGCCGGCTTCGTTCG‑CGCCGGCGCCCTGGCCAGTACCTACAG                                                                                                                                  <  2:215466/149‑1                                                  GGCCAGCGCGTCGGCGGCTGGTCGAGCAACTGGTCGAGCACCCACAGCCAGTCGTCCTGGTCGCTGTAGGTACTGGCCAGGGCGCCGGC‑GCGAACGAAGCCGGC                                                                                                                                                      >  7:235999/1‑104                                                  GGCCAGCGCGTCGGCGGCTGGTCGAGCAACTGGTCGAGCACCCACAGCCAGTCGTCCTGGTCGCTGTAGGTACTGGCCAGGGCGCCGGC‑GCGAACGAAGCCGGC                                                                                                                                                      <  8:235999/104‑1                                                                                                                           TGGCCAGGGCGCCGGC‑GCGAACGAAGCCGGCGCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCTGG                                                                     <  3:248091/112‑1                                                                                                                           TGGCCAGGGCGCCGGC‑GCGAACGAAGCCGGCGCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCTGG                                                                     >  4:248091/1‑112                                                                                                                                                       CGGCGCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCTGGCCGCGCAGCCTGTACCCGGTGCGTTACGGCGTCAGTGGCAACCAGCAGGTGGCCCGTGCCCTGG     <  3:343687/149‑1                                                                                                                                                       CGGCGCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCTGGCCGCGCAGCCTGTACCCGGTGCGTTACGGCGTCAGTGGCAACCAGCAGGTGGCCCGTGCCCTGG     <  4:176701/149‑1                                                                                                                                                       CGGCGCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCTGGCCGCGCAGCCTGTACCCGGTGCGTTACGGCGTCAGTGGCAACCAGCAGGTGGCCCGTGCCCTGG     <  8:312939/149‑1                                                                                                                                                       CGGCGCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCTGGCCGCGCAGCCTGTACCCGGTGCGTTACG                                         <  2:309062/113‑1                                                                                                                                                       CGGCGCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCTGGCCGCGCAGCCAGTACCCGGTGCGTTACG                                         >  1:309062/1‑113                                                                                                                                                        GGCGCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCTGGCCGCGCAGCCTGTACCCGGTGCGTTACGGCGTCAGTGGCAACCAGCAGGTGGCCCGTGCCCTGGG    <  6:369181/149‑1                                                                                                                                                          CGCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCTGGCCGCGCAGCCTGTACCCGGTGCGTTACGGCGTCAGTGGCAACCAGCAGGTGGCCCGTGCCCTGGGTC  >  2:70474/1‑149                                                                                                                                                          CGCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCTGGCCGCGCAGCCTGTACCCGGTGCGTTACGGCGTCAGTGGCAACCAGCAGGTGGCCCGTGCCCTGGGTC  <  3:34893/149‑1                                                                                                                                                           GCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCTGGCCGCGCAGCCTGTACCCGGTGC                                               <  3:348480/103‑1                                                                                                                                                           GCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCTGGCCGCGCAGCCTGTACCCGGTGC                                               >  4:348480/1‑103                                                                                                                                                                                                                                                                                                                CACCTGCTGGTTGCCACTGACGCCGTAACGCACCGGGTACAGGCTGCGCGGCCAGCGCGTCGGCGGCTGGTCGAGCAACTGGTCGAGCACCCACAGCCAGTCGTCCTGGTCGCTGTAGGTACTGGCCAGGGCGCCGGC‑GCGAACGAAGCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4714695‑4714542 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcgCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCTGGCCGCGCAGCCTGTACCCGGTGCGTTACGGCGTCAGTGGCAACCAGCAGGTGGCCCGTGCCCTGGGTC  >  NC_002947/4714565‑4714711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.