New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4793188 = | 74 (1.250) | 4 (0.070) | 4/246 | NT | 5.3% | coding (652/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
? | NC_002947 | 4793224 = | 71 (1.250) | coding (616/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
CGCCGTGGCCGGCCAGGCGTCAGCACTTGCGCCGCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4793228‑4793188 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaCGGCGGCATCGTAAAGC‑CGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCAAGCGCACCCGCATCAGCGGCCCGGCGGCC > NC_002947/4793224‑4793369 CGCCGTGGCCGGCCAGGCGTCAGCACTTGCGCCGCTGGCCACGGCGGCATCGTAAAGCGGGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAG > 1:108624/1‑149 GCCGTGGCCGGCCAGGCGTCAGCACTTGCGCCGCTGGCCACGGCGGCATCGTAAAGC‑CGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGT < 3:35831/149‑1 GCCGTGGCCGGCCAGGCGTCAGCACTTGCGCCGCTGGCCACGGCGGCATCGTAAAGC‑CGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGT > 4:35831/1‑149 GCCGGCCAGGCGTCAGCACTTGCGCCGCTGGCCACGGCGGCATCGTAAAGC‑CGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAG > 4:279178/1‑149 GGCCACGGCGGCATCGTAAAGC‑CGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCAAGCGCACCCGCATCAGCGGCCCGGCGG < 6:323964/149‑1 GGCCACGGCGGCATCGTAAAGC‑CGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGG < 8:278398/107‑1 GCCACGGCGGCATCGTAAAGC‑CGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCAAGCGCACCCGCATCAGCGGCCCGGCG < 3:279178/147‑1 GCCACGGCGGCATCGTAAAGC‑CGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCAAGCGCACCC > 8:38640/1‑130 CACGGCGGCATCGTAAAGC‑CGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCAAGCGCACCCGCATCAGCGGCCCGGCGGCC > 6:148775/1‑148 CGCCGTGGCCGGCCAGGCGTCAGCACTTGCGCCGCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4793228‑4793188 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaCGGCGGCATCGTAAAGC‑CGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCAAGCGCACCCGCATCAGCGGCCCGGCGGCC > NC_002947/4793224‑4793369 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |