New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4795079	66 (1.120)	4 (0.070)	3/244	NT	5.8%	intergenic (‑101/+5)	PP_4222/pvdH	protein SyrP/diaminobutyrate‑2‑oxoglutarate transaminase
	?	NC_002947	= 4795114	67 (1.190)					coding (1329/1359 nt)	pvdH	diaminobutyrate‑2‑oxoglutarate transaminase

CCCCGTTCGGGCATCAATGGCCGCGCCTTGATCCCGGCAAGTACACTCATGTTTCGCTCTCCTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4794929‑4795079 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcTGCAGTCGCCGCCGCCGTAGGCAGCGTTTGACGCCGCGCTGCATGCCACTGTTTGACGCGGTCGGCCTGCAAGGCTGGCCGCCAACCCAAGCGTGTCGACGGTCTCTACGGAGCCTGGCGACAAGGAGAGCGAAACATGAGTG  <  NC_002947/4795114‑4794972                                                                                                                                                                                                                                                                                                        CCCCGTTCGGGCATCAATGGCCGCGCCTTGATCCCGGCAAGTACACTCATGTTTCGCTCTCCTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGC                                                                                                                                                   >  8:154342/1‑149   CCGTTCGGGCATCAATGGCCGCGCCTTGATCCCGGCAAGTACACTCATGTTTCGCTCTCCTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGC                                                                                                                                                 >  3:374779/1‑149                                            CACTCATGTTTCGCTCTCCTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCTGCAGTCGCCGCCGCCGTAGGCAGCGTTTGACGCCGCGCT                                                                                                         <  6:65898/148‑1                                                 ATGTTTCGCTCTCCTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGTCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCTGCAGTCGCCGCCGCCGTAGGCAGCGTTTGACGCCGCGCTGCAT                                                                                                     <  6:87813/147‑1                                                                                               GCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCTGCAGTCGCCGCCGCCGTAGGCAGCGTTTGACGCCGCGCT                                                                                                         <  7:277982/97‑1                                                                                               GCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGCTGCAGTCGCCGCCGCCGTAGGCAGCGTTTGACGCCGCGCT                                                                                                         >  8:277982/1‑97                                                                                                                                                  CAGCGCTGCAGTCGCCGCCGCCGTAGGCAGCGTTTGACGCCGCGCTGCATGCCACTGTTTGACGCGGTCGGCCTGCAAGGCTGGCCGCCAACCCAAGCGTGTCGACGGTCTCTACGGAGCCTGGCGACAAGGAGAGCGAAACATGAG    <  7:88733/147‑1                                                                                                                                                   AGCGCTGCAGTCGCCGCCGCCGTAGGCAGCGTTTGACGCCGCGCTGCATGCCACTGTTTGACGCGGTCGGCCTGCAAGGCTGGCCGCCAACCCAAGCGTGTCGACGGTCTCTACGGAGCCTGGCGACAAGGAGAGCGAAACATGAGTG  >  5:268847/1‑148                                                                                                                                                   AGCGCTGCAGTCGCCGCCGCCGTAGGCAGCGTTTGACGCCGCGCTGCATGCCACTGTTTGACGCGGTCGGCCTGCAAGGCTGGCCGCCAACCCAAGCGTGTCGACGGTCTCTACGGAGCCTGGCGACAAGGAGAGCGAAACATGAGTG  <  7:342537/148‑1                                                                                                                                                      GCTGCAGTCGCCGCCGCCGTAGGCAGCGTTTGACGCCGCGCTGCATGCCACTGTTTGACGCGGTCGGCCTGCAAGGCTGGCCGCCAACCCAAGCGTGTCGACGGTCTCTACGGAG                                <  5:61279/115‑1                                                                                                                                                      GCTGCAGTCGCCGCCGCCGTAGGCAGCGTTTGACGCCGCGCTGCATGCCACTGTTTGACGCGGTCGGCCTGCAAGGCTGGCCGCCAACCCAAGCGTGTCGACGGTCTCTACGGAG                                >  6:61279/1‑115                                                                                                                                                                                                                                                                                                        CCCCGTTCGGGCATCAATGGCCGCGCCTTGATCCCGGCAAGTACACTCATGTTTCGCTCTCCTTGTCGCCAGGCTCCGTAGAGACCGTCGACACGCTTGGGTTGGCGGCCAGCCTTGCAGGCCGACCGCGTCAAACAGTGGCATGCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4794929‑4795079 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcTGCAGTCGCCGCCGCCGTAGGCAGCGTTTGACGCCGCGCTGCATGCCACTGTTTGACGCGGTCGGCCTGCAAGGCTGGCCGCCAACCCAAGCGTGTCGACGGTCTCTACGGAGCCTGGCGACAAGGAGAGCGAAACATGAGTG  <  NC_002947/4795114‑4794972

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.