| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4814531 = | 66 (1.120) | 5 (0.090) | 4/240 | NT | 8.2% | coding (99/1203 nt) | PP_4240 | microcin B17 processing protein McbD |
| ? | NC_002947 | 4814567 = | 50 (0.900) | coding (135/1203 nt) | PP_4240 | microcin B17 processing protein McbD | |||||
GCACTCTTCAGTGGTCAGCCCGTCACCTAGTCTGCACGTGTCATGCACAGGGATGTCCAAGTAGAAATGCTTGCGTTCAAAATGTTCGCCTAGGGCGCTGTCAGTTATGTCTGACGACCAGCCGCTACTCGAACCATAGGTGCGCCAGCGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4814684‑4814531‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggctgGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGGACATCCCTGTGCATGACACGTGCAGACTAGGTGACGGGCTGACCACTGAAGAGTGCCAAGCATTCACCAAGGCATTTTCT > NC_002947/4814567‑4814708 GCACTCTTCAGTGGTCAGCCCGTCACCTAGTCTGCACGTGTCATGCACAGGGATGTCCAAGTAGAAATGCTTGCGTTCAAAATGTTCGCCTAGGGCGCTGTCAGTTATGTCTGACGACCAGCCGCTACTCGAACCATAGGTGCGCCAGC > 8:122967/1‑149GCACTCTTCAGTGGTCAGCCCGTCACCTAGTCTGCACGTGTCATGCACAGGGATGTCCAAGTAGAAATGCTTGCGTTCAAAATGTTCGCCTAGGGCGCTGTCAGTTATGTCTGACGACCAGCCGCTACTCGAACCATAGGTGCGCCAGC < 8:345330/149‑1 TCTTCAGTGGTCAGCCCGTCACCTAGTCTGCACGTGTCATGCACAGGGATGTCCAAGTAGAAATGCTTGCGTTCAAAATGTTCGCCTAGGGCGCTGTCAGTTATGTCTGACGACCAGCCGCTACTCGAACCATAGGTGCGCCAGCGGCT > 3:374240/1‑149 GACCAGCCGCTACTCGAACCATAGGTGCGCCAGCGGCTGGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGGACATCCCTGTGCATGACACGTGCAGACTAGGTGACGGGCTGACCACT > 3:327461/1‑148 ACCAGCCGCTACTCGAACCATAGGTGCGCCAGCGGCTGGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGG > 3:233586/1‑100 ACCAGCCGCTACTCGAACCATAGGTGCGCCAGCGGCTGGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGG < 4:233586/100‑1 GCTACTCGAACCATAGGTGCGCCAGCGGCTGGTCGTCAGACATAACAGACAGCCCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGGACATCCCTGTGCATGACACGTGCAGACTAGGTGACGGCATCACAACTGAAAAGTca > 6:266161/1‑147 GGTGCGGCAGCGGCTGGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTGTACTTGGACATCACTGTGCATGACACGTGCAGACTAGGTGACGGGCTGACCACTGAAGAGTGCGAAGCATTCTCCAtg < 5:266161/149‑3 GCGGCTGGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGGACATCCCTGTGCATGACACGTGCAGACTAGGTGACGGGCTGACCACTGAAGAGTGCCAAGCATTCACCAAGGCATTTTCT < 4:256599/149‑1 GCACTCTTCAGTGGTCAGCCCGTCACCTAGTCTGCACGTGTCATGCACAGGGATGTCCAAGTAGAAATGCTTGCGTTCAAAATGTTCGCCTAGGGCGCTGTCAGTTATGTCTGACGACCAGCCGCTACTCGAACCATAGGTGCGCCAGCGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4814684‑4814531‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggctgGTCGTCAGACATAACTGACAGCGCCCTAGGCGAACATTTTGAACGCAAGCATTTCTACTTGGACATCCCTGTGCATGACACGTGCAGACTAGGTGACGGGCTGACCACTGAAGAGTGCCAAGCATTCACCAAGGCATTTTCT > NC_002947/4814567‑4814708 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |