New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4830189 = | 61 (1.030) | 4 (0.070) | 3/238 | NT | 6.6% | coding (1001/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
? | NC_002947 | 4830241 = | 57 (1.040) | coding (949/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
TTCGCTGGCCGGGCTCGACCTGAGCCGCTGGCGCGTGGCCTATTCCGGCTCCGAGCCTATCCGCCAGGACAGCCTGGCCACCTTTGCCGACAAGTTCCAGGCCTGTGGCTTCGACCCGCAGAGCTTCTTCGCCAGTTATGGCCTGGCCGAAGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4830344‑4830189 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaagccacAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAGCCCGGCCAGCGAAGCCTCGCTGACCCGCTCGCTGCACAGGCGATAAGCGAAGTCGGG > NC_002947/4830241‑4830388 TTCGCTGGCCGGGCTCGACCTGAGCCGCTGGCGCGTGGCCTATTCCGGCTCCGAGCCTATCCGCCAGGACAGCCTGGCCACCTTTGCCGACAAGTTCCAGGCCTGTGGCTTCGACCCGCAGAGCTTCTTCGCCAGTTATGGCCTGGCC > 1:128275/1‑148 GCTGGCCGGGCTCGACCTGAGCCGCTGGCGCGTGGCCTATTCCGGCTCCGAGCCTATCCGCCAGGACAGCCTGGCCACCTTTGCCGACAAGTTCCAGGCCTGTGGCTTCGACCCGCAGAGCTTCTTCGCCAGTTATGGCCTGGCCGAA < 4:17383/148‑1 CTGGCCGGGCTCGACCTGAGCCGCTGGCGCGTGGCCTATTCCGGCTCCGAGCCTATCCGCCAGGACAGCCTGGCCACCTTTGCCGACAAGTTCCAGGCCTGTGGCTTCGACCCGCAGAGCTTCTTCGCCAGTTATGGCCTGGCCGAAGC < 7:336310/149‑1 AGGCCTGTGGCTTCGACCCGCAGAGCTTCTTCGCCAGTTATGGCCTGGCCGAAGCCACAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAG > 2:89901/1‑149 TGTGGCTTCGACCCGCAGAGCTTCTTCGCCAGTTATGGCCTGGCCGAAGCCACAGGCCTGGCACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGACTAGGCCACGCGCCCGCGGCTCAGGTCGCGCCCGG > 8:44431/1‑149 TGTGGCTTCGACCCGCAGAGCTTCTTCGCCAGTTATGGCCTGGCCGAAGCCACAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCGTGGCGGATAGGCTCGGGGCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAGCCCGG > 1:20571/1‑149 GACCCGCAGAGCTTCTTCGCCAGTAATGGCCTGGCCGAAGCCACAGGCCTGTAACTTGTCGGCAACGGGGGCCAGGCTGTCCTGGCGGATAGGCGCGGTCCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAGCCCGGCCAGCGAA < 1:89901/148‑1 GAAGCCACAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAGCCCGGCCAGCGAAGCCTCGCTGACCCGCTCGCTGCACAGGCGATAAGCG < 8:171281/148‑1 GAAGCCACAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAGCCCGGCCAGCGAAGCCTCGCTGACCCGCTCGCTGCACAGGC < 5:128734/140‑1 GAAGCCACAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAGCCCGGCCAGCGAAGCCTCGCTGACCCGCTCGCTGCACAGGC > 6:128734/1‑140 GAAGCCACAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAGCCCGGCCAGCGAAGCCTCGCTGACCCGCTCGCTGCACAGG < 2:359283/139‑1 GAAGCCACAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAGCCCGGCCAGCGAAGCCTCGCTGACCCGCTCGCTGCACAGG > 1:359283/1‑139 AAGCCACAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGAATAGGCCTCGCGCCAGCGGCTCAGGTCGAGCCCGGCCAGCGAAGCCTCGCTGACCCGCTCGCTGCACAGGCGATAAGCGAA < 4:94249/149‑1 AAGCCACAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAGCCCGGCCAGCGAAGCCTCGCTGACCCGCTCGCTGCACAGGCGATAAGCG > 5:332820/1‑147 AGCCACAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAGCCCGGCCAGCGAAGCCTCGCTGACCCGCTCGCTGCACAGGCGATAAGCGAAG > 4:78821/1‑149 CACAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAGCCC < 5:152901/97‑1 CACAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAGCCC > 6:152901/1‑97 ACAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAGCCCGGCCAGCGAAGCCTCGCTGACCCGCTCGCTGCACAGGCGATAAGCGAAGTCGG > 5:390733/1‑149 CAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAGCCCGGCCAGCGAAGCCTCGCTGACCCGCTCGCTGCACAGGCGATAAGCGAAGTCGGG < 3:78821/149‑1 TTCGCTGGCCGGGCTCGACCTGAGCCGCTGGCGCGTGGCCTATTCCGGCTCCGAGCCTATCCGCCAGGACAGCCTGGCCACCTTTGCCGACAAGTTCCAGGCCTGTGGCTTCGACCCGCAGAGCTTCTTCGCCAGTTATGGCCTGGCCGAAGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4830344‑4830189 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaagccacAGGCCTGGAACTTGTCGGCAAAGGTGGCCAGGCTGTCCTGGCGGATAGGCTCGGAGCCGGAATAGGCCACGCGCCAGCGGCTCAGGTCGAGCCCGGCCAGCGAAGCCTCGCTGACCCGCTCGCTGCACAGGCGATAAGCGAAGTCGGG > NC_002947/4830241‑4830388 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |