| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4868046 = | 72 (1.220) | 4 (0.070) | 4/250 | NT | 5.4% | coding (1243/1455 nt) | xdhA | xanthine dehydrogenase subunit XdhA |
| ? | NC_002947 | 4868123 = | 70 (1.210) | coding (1320/1455 nt) | xdhA | xanthine dehydrogenase subunit XdhA | |||||
GCAGCAGGTTCTGCGCGGTCAGCAGGCGGTATTCCTTGCTGGCGCGGAAGTCGCTGAGCGGGGTGAAGTCCTCGGCCAGGGCCTGGCAGGCGCGCTCGATGGCAGCCTGGTCCCACGGCTTGCCGCGCAGCGCCGCCTCACAGGCGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4868196‑4868046‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCGAGGACTTCACCCCGCTCAGCGACTTCCGCGCCAGCAAGGAATACCGCCTGCTGACCGCGCAGAACCTGCTGCGCAAGTATTTCATCGAACAGCAAACACCGTACATCGAAACCCGGGTGACCGCTTATGTCTAACCATCACGTA > NC_002947/4868123‑4868268 GCAGCAGGTTCTGCGCGGTCAGCAGGCGGTATTCCTTGCTGGCGCGGAAGTCGCTGAGCGGGGTGAAGTCCTCGGCCAGGGCCTGGCAGGCGCGCTCGATGGCAGCCTGGTCCCACGGCTTGCCGCGCAGCGCCGCCTCACAGGCGCGG < 4:99875/149‑1GCAGCAGGTTCTGCGCGGTCAGCAGGCGGTATTCCTTGCTGGCGCGGAAGTCGCTGAGCGGGGTGAAGTCCTCGGCCAGGGCCTGGCAGGCGCGCTCGATGGCAGCCTGGTCCCACGGCTTGCCGCGCAGCGCCGCCTCACAGGCGCGG < 7:3243/149‑1 CTTGCTGGCGCGGAAGTCGCTGAGCGGGGTGAAGTCCTCGGCCAGGGCCTGGCAGGCGCGCTCGATGGCAGCCTGGTCCCACGGCTTGCCGCGCAGCGCCGCCTCACAGGCGCGG < 3:141249/115‑1 CTTGCTGGCGCGGAAGTCGCTGAGCGGGGTGAAGTCCTCGGCCAGGGCCTGGCAGGCGCGCTCGATGGCAGCCTGGTCCCACGGCTTGCCGCGCAGCGCCGCCTCACAGGCGCGG > 4:141249/1‑115 CAGGGCCTGGCAGGCGCGCTCGATGGCAGCCTGGTCCCACGGCTTGCCGCGCAGCGCCGCCTCACAGGCGCGGGCCGAGGACTTCACCCCGCTCAGCGACTTCCGCGCCAGCAAGGAATACCGCCTGCTGACCGCGCAGAACCTGCTGC > 8:138260/1‑149 CTGGCAGGCGCGCTCGATGGCAGCCTGGTCCCACGGCTTGCCGCGCAGCGCCGCCTCACAGGCGCGGGCCGAGGACTTCACCCCGCTCAGCGACTTCCGC > 1:232963/1‑100 CTGGCAGGCGCGCTCGATGGCAGCCTGGTCCCACGGCTTGCCGCGCAGCGCCGCCTCACAGGCGCGGGCCGAGGACTTCACCCCGCTCAGCGACTTCCGC < 2:232963/100‑1 CTTGCCGCGCAGCGCCGCCTCACAGGCGCGGGCCGAGGACTTCACCCCGCTCAGCGACTTCCGCGCCAGCAAGGAATACCGCCTGCTGACCGCGCAGAACCTGCTGCGCAAGTATTTCATCGAACAGCAAACACCGTACATCGAAACCC < 7:138260/149‑1 GCCGAGGACTTCACCCCGCTCAGCGACTTCCGCGCCAGCAAGGAATACCGCCTGCTGACCGCGCAGAACCTGCTGCGCAAGTATTTCATCGAACAGCAAACACCGTACATCGAAACCCGGGTGACCGCTTATGTCTAACCATCACGT < 3:115661/147‑1 GCCGAGGACTTCACCCCGCTCAGCGACTTCCGCGCCAGCAAGGAATACCGCCTGCTGACCGCGCAGAACCTGCTGCGCAAGTATTTCATCGAACAGCAAACACCGTACATCGAAACCCGGGTGACCGCTTATGTCTAACCATCACGT < 4:314094/147‑1 CCGAGGACTTCACCCCGCTCAGCGACTTCCGCGCCAGCAAGGAATACCGCCTGCTGACCGCGCAGAACCTGCTGCGCAAGTATTTCATCGAACAGCAAACACCGTACATCGAAACCCGGGTGACCGCTTATGTCTAACCATCACGTA < 1:91359/147‑1 CCGAGGACTTCACCCCGCTCAGCGACTTCCGCGCCAGCAAGGAATACCGCCTGCTGACCGCGCAGAACCTGCTGCGCAAGTATTTCATCGAACAGCAAACACCGTACATCGAAACCCGGGTGACCGCTTATGTCTAACCATCACGTA > 2:91359/1‑147 GCAGCAGGTTCTGCGCGGTCAGCAGGCGGTATTCCTTGCTGGCGCGGAAGTCGCTGAGCGGGGTGAAGTCCTCGGCCAGGGCCTGGCAGGCGCGCTCGATGGCAGCCTGGTCCCACGGCTTGCCGCGCAGCGCCGCCTCACAGGCGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4868196‑4868046‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCGAGGACTTCACCCCGCTCAGCGACTTCCGCGCCAGCAAGGAATACCGCCTGCTGACCGCGCAGAACCTGCTGCGCAAGTATTTCATCGAACAGCAAACACCGTACATCGAAACCCGGGTGACCGCTTATGTCTAACCATCACGTA > NC_002947/4868123‑4868268 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |