| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5146607 = | 58 (0.980) | 3 (0.050) | 3/246 | NT | 5.4% | coding (147/1323 nt) | srmB | ATP‑dependent DEAD‑box RNA helicase |
| ? | NC_002947 | 5146673 = | 49 (0.860) | coding (81/1323 nt) | srmB | ATP‑dependent DEAD‑box RNA helicase | |||||
CTCCGTGTTCTCCCAATTCGCCCTGCATGAACGCCTGCTTAAAGCCGTGGCCGAGCTTAAATTTGTCGAGCCAACCCCGGTGCAGGCCGCGGCCATCCCCCTGGCCCTGCAAGGGCGGGATCTGCGTGTGACTGCGCAGACCGGCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5146757‑5146607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcCTGCACCGGGGTTGGCTCGACAAATTTAAGCTCGGCCACGGCTTTAAGCAGGCGTTCATGCAGGGCGAATTGGGAGAACACGGAGGTAACCTCAGACAAGTGCGGGAAATTCAGTTGCATAGGGTAACGTTTTCTGCAGCCTTAGCC > NC_002947/5146673‑5146819 CTCCGTGTTCTCCCAATTCGCCCTGCATGAACGCCTGCTTAAAGCCGTGGCCGAGCTTAAATTTGTCGAGCCAACCCCGGTGCAGGCCGCGGCCATCCCCCTGGCCCTGCAAGGGCGGGATCTGCGTGTGTCTGCGCAGACCGGCAGCG < 2:219551/149‑1CTCCGTGTTCTCCCAATTCGCCCTGCATGAACGCCTGCTTAAAGCCGTGGCCGAGCTTAAATTTGTCGAGCCAACCCCGGTGCAGGCCGCGGCCATCCCCCTGGCCCTGCAAGGGCGGGATCTGCGTGTGACTGCGCAGACCGGCAGCG > 6:196050/1‑149 CGTGTTCTCCCAATTCGCCCTGCATGAACGCCTGCTTAAAGCCGTGGCCGAGGTTAAATTTGTCGAGCCAACCCCGGTGAAGGCCGCGGCCATCCCCCTGGCCCTGCAAGGGCGGGATCTGCGTGTGACTGCGCAGACCGGCAGCGGC > 7:63456/1‑148 CCCGGTGCAGGCCGCGGCCATCCCCCTGGCCCTGCAAGGGCGGGATCTGCGTGTGACTGCGCAGACCGGCAGCG > 5:154906/1‑74 CCCGGTGCAGGCCGCGGCCATCCCCCTGGCCCTGCAAGGGCGGGATCTGCGTGTGACTGCGCAGACCGGCAGCG < 6:154906/74‑1 CAGGCCGCGGCCATCCCCCTGGCCCTGCAAGGGCGGGATCTGCGTGTGACTGCGCAGACCGGCAGCGGCCTGCACCGGGGTTGGCTCGACAAATTTAAGCTCGGCCACGGCTTTAAGCAGGCGTTCATGCAGGGCGAATTGGGAGAACA > 4:35535/1‑149 AGGCCGCGGCCATCCCCCTGGCCCTGCAAGGGCGGGATCTGCGTGTGACTGCGCAGACCGGCAGCGGCCTGCACCGGGGTTGGCTCGACAAATTTAAGCTCGGCCACGGCTTTAAGCAGGCGTTCATGCAGGGCGAATTGGGAGAACAC > 3:232473/1‑149 GGGCGGGATCTGCGTGTGACTGCGCAGACCGGCAGCGGCCTGCACCGGGGTTGGCTCGACAAATTTAAGCTCGGCCACGGCTTTAAGCAGGCGTTCATGCAGGGCGAATTGGGAGAACACGGAGGTAACCTCAGACAAGTGCGGGAAAT < 3:35535/149‑1 CGGCCTGCACCGGGGTTGGCTCGACAAATTTAAGCTCGGCCACGGCTTTAAGCAGGCGTTCATGCAGGGCGAATTGGGAGAACACGGAGGTAACCTCAGACAAGTGCGGGAAATTCAGTTGCATAGGGTAACGTTTTCTGCAGCCTTAG < 8:195097/149‑1 CCTGCACAGGGGTTGGCTCGACAAATTTAAGCTCGGCCACGGCTTTAAGCAGGCGTTCATGCAGGGCGAATTGGGAGAACACGGAGGTAACCTCAGACAAGTGCGGGAAATTCAGTTGCATAGGGTAACGTTTTCTGCAGCCTTAGCC > 1:53650/1‑148 CTCCGTGTTCTCCCAATTCGCCCTGCATGAACGCCTGCTTAAAGCCGTGGCCGAGCTTAAATTTGTCGAGCCAACCCCGGTGCAGGCCGCGGCCATCCCCCTGGCCCTGCAAGGGCGGGATCTGCGTGTGACTGCGCAGACCGGCAGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5146757‑5146607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcCTGCACCGGGGTTGGCTCGACAAATTTAAGCTCGGCCACGGCTTTAAGCAGGCGTTCATGCAGGGCGAATTGGGAGAACACGGAGGTAACCTCAGACAAGTGCGGGAAATTCAGTTGCATAGGGTAACGTTTTCTGCAGCCTTAGCC > NC_002947/5146673‑5146819 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |