New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5228121	72 (1.220)	4 (0.070)	4/244	NT	5.6%	coding (938/2391 nt)	PP_4606	ferric siderophore receptor
	?	NC_002947	= 5228142	67 (1.190)					coding (917/2391 nt)	PP_4606	ferric siderophore receptor

GAACGGCTCGTCCAGGCGGCGCGTGGCAGGGATGTTCAGCGGGTGGCCGTTGTTGCCGAACGCGGTG‑‑CCACGGTCGAACGGATAGAGAAATTCACGGTGCTCGTAGGCCAGCACCACCTGGGTGTCTTCGCCCAGCCAGGCCAGCGACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5227970‑5228121 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcgTGCACCGCGAATCGCTGGTGGCGCCGTCGC  <  NC_002947/5228142‑5228113                                                                                                                                                                                          GAACGGCTCGTCCAGGCGGCGCGTGGCAGGGATGTTCAGCGGGTGGCCGTTGTTGCCGAACGCGGTG‑‑CCACGGTCGAACGGATAGAGAAATTCACGGTGCTCGTAGGCCAGCACCACCTGGGTGTCTTCGCCCATCCAGGCCAGCGACG                                   >  2:303782/1‑149  AACGGCTCGTCCAGGCGGCGCGTGGCAGGGATGTTCAGCGGGTGGCCGTTGTTGCCGAACGCGGTGGTACACGGTCGAACGGATAGAGAAATTCACGGTGCTCGTAGGCCAGCACCACCTGGGTGTCTTCGCCCAGCCAGGCCAGCGAC                                    >  1:113020/1‑149   ACGGCTCGTACAGGCGGCGAGTGGCAGGGATTTTCAGCTGTTGGCGGTTGTTGCCGAACGCGGTG‑‑CCACGGTCGAACGGATAGAGAAATTCACGGTGCTAGTAGGCCAGCACCACCTGTGTGTCTTCGCCCAGCCAGGCCAGCGACGGC                                 <  6:314221/149‑1        TCGTCCAGGCGGCGCGTGGCAGGGATGTTCAGCGGGTGGCCGTTGTTGCCGAACGCGGTG‑‑CCACGGTCGAACGGATAGAGAAATTCACGGTGCTCGTAGGCCAGCACCACCTGGGTGTCTTCGCCCAGCCAGGCCAGCGACGGC                                 >  5:70835/1‑144        TCGTCCAGGCGGCGCGTGGCAGGGATGTTCAGCGGGTGGCCGTTGTTGCCGAACGCGGTG‑‑CCACGGTCGAACGGATAGAGAAATTCACGGTGCTCGTAGGCCAGCACCACCTGGGTGTCTTCGCCCAGCCAGGCCAGCGACGGC                                 >  5:76265/1‑144        TCGTCCAGGCGGCGCGTGGCAGGGATGTTCAGCGGGTGGCCGTTGTTGCCGAACGCGGTG‑‑CCACGGTCGAACGGATAGAGAAATTCACGGTGCTCGTAGGCCAGCACCACCTGGGTGTCTTCGCCCAGCCAGGCCAGCGACGGC                                 <  6:70835/144‑1        TCGTCCAGGCGGCGCGTGGCAGGGATGTTCAGCGGGTGGCCGTTGTTGCCGAACGCGGTG‑‑CCACGGTCGAACGGATAGAGAAATTCACGGTGCTCGTAGGCCAGCACCACCTGGGTGTCTTCGCCCAGCCAGGCCAGCGACGGC                                 <  6:76265/144‑1                     GCGTGGCAGGGATGTTCAGCGGGTGGCCGTTGTTGCCGAACGCGGTG‑‑CCACGGTCGAACGGATAGAGAAATTCACGGTGCTCGTAGGCCAGCACCACCTGGGTGTCTTCACCCAGCCAGGCCAGCGAC                                    <  7:124458/128‑1                     GCGTGGCAGGGATGTTCAGCGGGTGGCCGTTGTTGCCGAACGCGGTG‑‑CCACGGTCGAACGGATAGAGAAATTCACGGTGCTCGTAGGCCAGCACCACCTGGGTGTCTTCACCCAGCCAGGCCAGCGAC                                    >  8:124458/1‑128                                ATGTTCAGCGGGTGGCCGTTGTTGCCGAACGCGGTG‑‑CCACGGTCGAACGGATAGAGAAATTCACGGTGCTCGTAGGCCAGCACCACCTGGGTGTCTTCGCCCAGCCAGGCCAGCGACGGCGTGCACCGCGAATCGCTGGTGGCGCCGTC    <  2:180827/149‑1                                   TTCAGCGGGTGGCCGTTGTTGCCGAACGCGGTG‑‑CCACGGTCGAACGGATAGAGAAATTCACGGTGCTCGTAGGCCAGCACCACCTGGGTGTCTTCGCCCAGCCAGGCCAGCGACGGCGTGCACCGCGAATCGCTGGTGGCGCCGTCGC  <  5:379075/148‑1                                                                          GGTCGAACGGATAGAGAAATTCACGGTGCTCGTAGGCCAGCACCACCTGGGTGTCTTCGCCCAGCCAGGCCAGCGACGGCGTGCACCGCGAATCGCTGGTGGCGCCG      <  1:80071/107‑1                                                                          GGTCGAACGGATAGAGAAATTCACGGTGCTCGTAGGCCAGCACCACCTGGGTGTCTTCGCCCAGCCAGGCCAGCGACGGCGTGCACCGCGAATCGCTGGTGGCGCCG      >  2:80071/1‑107                                                                                                                                                                                          GAACGGCTCGTCCAGGCGGCGCGTGGCAGGGATGTTCAGCGGGTGGCCGTTGTTGCCGAACGCGGTG‑‑CCACGGTCGAACGGATAGAGAAATTCACGGTGCTCGTAGGCCAGCACCACCTGGGTGTCTTCGCCCAGCCAGGCCAGCGACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5227970‑5228121 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcgTGCACCGCGAATCGCTGGTGGCGCCGTCGC  <  NC_002947/5228142‑5228113

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.