New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5263142	93 (1.570)	5 (0.090)	5/242	NT	5.3%	coding (1315/1488 nt)	PP_4638	methylenetetrahydrofolate reductase
	?	NC_002947	= 5263176	92 (1.650)					coding (1349/1488 nt)	PP_4638	methylenetetrahydrofolate reductase

GCTGGTGGGTTGCGACACCTGCGGCCGTTGCCGCCTGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCTGGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5262991‑5263142 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacagcgGTTTGCCGCACGGCTTTGGCGGTGCGGTACTTGACGCTGTGGATGCACTCGCGGTCGCCGAACTCGCAGCGGTTCAGGGCGGTTCCGCCGCAAGGGCCATTGGCCAGGCCTTTAGGGCAGGTTTCCGGGCAGATATACAAGGTGT  <  NC_002947/5263176‑5263032                                                                                                                                                                                                                                                                                                           GCTGGTGGGTTGCGACACCTGCGGCCGTTGCCGCCTGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCTGGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACA                                                                                                                                                      >  4:247911/1‑149  CTGGTGGGTTGCGACACCTGCGGCCGTTGCCGCCTGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCTGGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAG                                                                                                                                                     <  7:154551/149‑1                               CCGCCTGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCTGGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGGTTTGCCGCACGGCTTTGGCGGTGCGG                                                                                                                        >  5:311837/1‑149                                    TGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCTGGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGGTTTGCCGCACGGCTTTGGCGGTGCGGTACTT                                                                                                                   >  3:131851/1‑149                                           CACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCTGGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGGTTTGCCGCACGGCTTTGGCGGTGCGGTACTTGACGCT                                                                                                             <  6:311837/148‑1                                                 GTATATCTGCCCGGAAACCTGCCCTAAAGGCCTGGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGGTTTGCCGCACGGCTTTGGCGGTGCGGTACTTGACGCTGTGGAT                                                                                                       <  6:296518/148‑1                                                 GTATATCTGCCCGGAAACCTGCCCTAAAGGCCTGGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCGGTTTGCCGCACGGCTTTGGCGGTGCGGTACTTGACGCTGTGGA                                                                                                        <  4:131851/147‑1                                                                                                                                                   ACAGCGGTTTGCCGCACGGCTTTGGCGGTGCGGTACTTGACGCTGTGGATGCACTCGCGGTCGCCGAACTCGCAGCGGTTCAGGGCGGTTCCGCCGCAAGGGCCATTGGCCAGGCCTTTAGGGCAGGTTTCCGGGCAGATATACAAGGT    <  8:285572/149‑1                                                                                                                                                     AGCGGTTTGCCGCACGGCTTTGGCGGTGCGGTACTTGACGCTGTGGATGCACTCGCGGTCGCCGAACTCGCAGCGGTTCAGGGCGGTTCCGCCGCAAGGGCCATTGGCCAGGCCTTTAGGGCAGGTTTCCGGGCAGATATACAAGGTGT  >  6:260231/1‑149                                                                                                                                                                                                                                                                                                           GCTGGTGGGTTGCGACACCTGCGGCCGTTGCCGCCTGGAAGACACCTTGTATATCTGCCCGGAAACCTGCCCTAAAGGCCTGGCCAATGGCCCTTGCGGCGGAACCGCCCTGAACCGCTGCGAGTTCGGCGACCGCGAGTGCATCCACAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5262991‑5263142 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacagcgGTTTGCCGCACGGCTTTGGCGGTGCGGTACTTGACGCTGTGGATGCACTCGCGGTCGCCGAACTCGCAGCGGTTCAGGGCGGTTCCGCCGCAAGGGCCATTGGCCAGGCCTTTAGGGCAGGTTTCCGGGCAGATATACAAGGTGT  <  NC_002947/5263176‑5263032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.