| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5273698 = | 76 (1.290) | 4 (0.070) | 3/242 | NT | 5.5% | coding (845/1125 nt) | rlmG | ribosomal RNA large subunit methyltransferase G |
| ? | NC_002947 | 5273737 = | 66 (1.180) | coding (884/1125 nt) | rlmG | ribosomal RNA large subunit methyltransferase G | |||||
CCAGCGCTTCACGCGCCTGCTGGAACATGCGCCAGGCGAGGAAATCGCCTACTACCTGCTGTTGGTGGAACGGCGGGTTGCACAGCACCACGTCCAGCGACTGTTTCTCCAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5273847‑5273698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgggcTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGCTGGTGGTAGGTGGGGCGCTGTACATCGTAGGTAACCGGCA > NC_002947/5273737‑5273884 CCAGCGCTTCACGCGCCTGCTGGAACATGCGCCAGGCGAGGAAATCGCCTACTACCTCCTGTTGGTGGAACGGCGGGTTGCACAGCACCACGTCCAGCGACTGTTTCTCCAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGG > 6:382750/1‑149CCAGCGCTTCACGCGCCTGCTGGAACATGCGCCAGGCGAGGAAATCGCCCACTACCTGCTGTTGGTGGAACGGCGGGTTGCACAGCACCACGTCCAGCGACTGTTTCTCCAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGG < 5:54677/149‑1 CAGCGCTTCACGCGCCTGCTGGAACATGCGCCAGGCGAGGAAATCGCCTACTACCTGCTGTTGGTGGAACGGCGGGTTGCACAGCACCACGTCCAGCGACTGTTTCTCCAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGC > 1:183212/1‑149 CACGCGCCTGCTGGAACATGCGCCAGGCGAGGAAATCGCCTACTACCTGCTGTTGGTGGAACGGCGGGTTGCACAGCACCACGTCCAGCGACTGTTTCTCCAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGG < 3:257763/139‑1 CACGCGCCTGCTGGAACATGCGCCAGGCGAGGAAATCGCCTACTACCTGCTGTTGGTGGAACGGCGGGTTGCACAGCACCACGTCCAGCGACTGTTTCTCCAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGG > 4:257763/1‑139 CCAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCG > 7:277121/1‑149 AGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGCT > 3:297532/1‑149 AGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGCT > 7:315345/1‑149 CCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGCTGG < 8:277121/149‑1 GCCGGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGCTGGTGGTAGGTGGGGCGCTGTACATCGTAGGTAA > 4:165268/1‑149 GGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGCTGGTGGTAGGTGGGGCGCTGTACATCGTAGGTAACCG < 3:165268/149‑1 GGGCTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGCTGGTGGTAGGTGGGGCGCTGTACATCGTAGGTAACCG < 5:28201/149‑1 CTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGCTGGTGGTAGGTGGGGCGCTGTACATCGTAGGTAACCGGCA > 1:199058/1‑149 CCAGCGCTTCACGCGCCTGCTGGAACATGCGCCAGGCGAGGAAATCGCCTACTACCTGCTGTTGGTGGAACGGCGGGTTGCACAGCACCACGTCCAGCGACTGTTTCTCCAGCCCGGCCAGGCCATCGGCCGCGAGGAAGGTCGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5273847‑5273698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgggcTGGAGAAACAGTCGCTGGACGTGGTGCTGTGCAACCCGCCGTTCCACCAACAGCAGGTAGTAGGCGATTTCCTCGCCTGGCGCATGTTCCAGCAGGCGCGTGAAGCGCTGGTGGTAGGTGGGGCGCTGTACATCGTAGGTAACCGGCA > NC_002947/5273737‑5273884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |