| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5408544 | 71 (1.200) | 4 (0.070) | 4/252 | NT | 5.3% | coding (194/1308 nt) | PP_4752 | Xaa‑Pro aminopeptidase |
| ? | NC_002947 | = 5408568 | 72 (1.240) | coding (170/1308 nt) | PP_4752 | Xaa‑Pro aminopeptidase | |||||
GGTGAACTCGAACAGCACCACCGGGCCGTCGGTGGCGACGAACACATAGCGGCTGGGCGAGTGCATCACCCACAAACCAAGGTTATTGGTGTCGGTGGCATAGCGAATATTGATCGGATCGGCCAACAGAATGCCGGCGTAATCCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5408396‑5408544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggAGCGCATTCGCGAGCAACTGCGCGCCCAGGATTACGCCGGCATTCTGTTGGCCGATCCGATCAATATTCGCTATGCCACCGACACCAATAACCTTGGTTTGTGGGTGATGCACTCGCCCAGCCGCTATGTGTTCGTCGCCACCGACG < NC_002947/5408568‑5408422 GGTGAACTCGAACAGCACCACCGGGCCGTCGGTGGCGACGAACACATAGCGGCTGGGCGAGTGCATCACCCACAAACCAAGGTTATTGGTGTCGGTGGCATAGCGAATATTGATCGGATCGGCCAACAGAATGCCGGCGTAATCCTGGG > 8:158936/1‑149GGTGAACTCGAACAGCACCACCGGGCCGTCGGTGGCGACGAACACATAGCGGCTGGGCGAGTGCATCACCCACAAACCAAGGTTATTGGTCTCGGTGGCATAGCGAATATTGATCGGATCGGCCAACAGAATGCCGCCGTAATCCTGGc > 7:263089/1‑148 CCGTCGGTGGCGACGAACACATAGCGGCTGGGCGAGTGCATCACCCACAAACCAAGGTTATTGGTGTCGGTGGCATAGCGAATATTGATCGGATCGGCCAACAGAATGCCGGCGTAATCCTGGGCGCGCATTCGCGAGCAACTGCGCGC < 5:32729/149‑1 ACATAGCGGCTGGGCGAGTGCATCACCCACAAACCAAGGTTATTGGTGTCGGTGGCATAGCGAATATTGATCGGATCGGCCAACAGAATGCCGGCGTAATCCTGGG > 3:307000/1‑106 ACATAGCGGCTGGGCGAGTGCATCACCCACAAACCAAGGTTATTGGTGTCGGTGGCATAGCGAATATTGATCGGATCGGCCAACAGAATGCCGGCGTAATCCTGGG < 4:307000/106‑1 AAACCAAGGTTATTGGTGTCGGTGGCATAGCGAATATTGATCGGATCGGCCAACAGAATGCCGGCGTAATCCTGGGAGCGCATTCGCGAGCAACTGCGCGCCCA < 5:120989/104‑1 AAACCAAGGTTATTGGTGTCGGTGGCATAGCGAATATTGATCGGATCGGCCAACAGAATGCCGGCGTAATCCTGGGAGCGCATTCGCGAGCAACTGCGCGCCCA > 6:120989/1‑104 CGTAATCCTGGGCGCGCAGTTGCTCGCGAATGCGCTCCCAGGATTACGCCGGCATTCTGTTGGCCGATCCGATCAATATTCGCTATGCCACCGACACCAATAACCTTGGTTTGTGGGTGATGCACTCGCCCAGCCGCTATGTGTTCGTC > 2:120265/1‑149 GAGCGCATTCGCGAGCAACTGCGCGCCCAGGATTACGCCGGCATTCTGTTGGCCGATCCGATCAATATTCGCTATGCCACCGACACCAATAACCTTGGTTTGTGGGTGATGCACTCGCCCAGCCGCTATGTGTTCGTCGCCACCGACG < 1:2981/148‑1 GAGCGCATTCGCGAGCAACTGCGCGCCCAGGATTACGCCGGCATTCTGTTGGCCGATCCGATCAATATTCGCTATGCCACCGACACCAATAACCTTGGTTTGTGGGTGATGCACTCGCCCAGCCGCTATGTGTTCGTCGCCACCGACG < 3:174418/148‑1 GGTGAACTCGAACAGCACCACCGGGCCGTCGGTGGCGACGAACACATAGCGGCTGGGCGAGTGCATCACCCACAAACCAAGGTTATTGGTGTCGGTGGCATAGCGAATATTGATCGGATCGGCCAACAGAATGCCGGCGTAATCCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5408396‑5408544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggAGCGCATTCGCGAGCAACTGCGCGCCCAGGATTACGCCGGCATTCTGTTGGCCGATCCGATCAATATTCGCTATGCCACCGACACCAATAACCTTGGTTTGTGGGTGATGCACTCGCCCAGCCGCTATGTGTTCGTCGCCACCGACG < NC_002947/5408568‑5408422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |