| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5637950 | 63 (1.070) | 4 (0.070) | 4/246 | NT | 6.4% | coding (484/1443 nt) | PP_4949 | TldD/PmbA family peptidase |
| ? | NC_002947 | = 5638011 | 57 (1.000) | coding (545/1443 nt) | PP_4949 | TldD/PmbA family peptidase | |||||
GCCCAACTTCGACCAACCCGTACCCAGCCTCGCCGACTGCCTTGGCCTGCTCGCCGCCGAATCGGCCAGCGTGCCCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5637799‑5637950‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgTCGCTGGCGGTCACCCCCAGGCCCGGGAACAGGAAGCGCTGGGCATGGCGCAGTTCGGCGCCGGCCGAGTTCAGGTAGGTTTGCTCGACCAGGCTCAGCCCCAGGCTGGCCTGCCAGTCCACCAAACGGCTGTCCTTGGGCACGC < NC_002947/5638011‑5637867 GCCCAACTTCGACCAACCCGTACCCAGCCTCGCCGACTGCCTTGGCCTGCTCGCCGCCGAATCGGCCAGCGTGCCCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGG < 3:191305/149‑1GCCCAACTTCGACCAACCCGTACCCAGCCTCGCCGACTGCCTTGGCCTGCTCGCCGCCGAATCGGCCAGCGTGCCCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCG < 6:333409/148‑1GCCCAACTTCGACCAACCCGTACCCAGCCTCGCCGACTGCCTTGGCCTGCTCGCCGCCGAATCGGCCAGCGTGCCCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCAGAGCCTGGTCGAGCAAACCTACCTGAACTCGG > 3:39331/1‑149 CCAACTTCGACCAACCCGTACCCAGCCTCGCCGACTGCCTTGGCCTGCTCGCCGCCGAATCGGCCAGCGTGCCCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGGCC > 7:357569/1‑149 TGCCTTGGCCTGCTCGCCGCCGAATCGGCCAGCGTGCCCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGGCCGTCGCTGGCGGTCACCCCCAGGCCCGGGAACAGG > 1:259278/1‑148 GCCTGCTCGCCGCCGAATCGGCCAGCGTGCCCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGGCCGTCGCTGGCGGTCACCCCCAGGCCCGGGAACAGGAAGCGCTG > 8:94738/1‑149 AGCGTGCCCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGGCCGTCGCTGGCGGTCACCCCCAGGCCCGGGAACAGGAAGCGCTGGGCATGGCGCAGTTCGGCGCCGG < 2:259278/149‑1 TGCCCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGGCCGTCGCTGGCGGTCACCCCCAGGCCCGGGAACAGGAAGCGCTGGGCATGGCGCAGTTCGGCGCCGGCCGA < 7:94738/149‑1 GCCGTCGCTGGCGGTCACCCCCAGGCCCGGGAACAGGAAGCGCTGGGCATGGCGCAGTTCGGCGCCGGCCGAGTTCAGGTAGGTTTGCTCGACCAGGCTCAGCCCCAGGCTGGCCTGCCAGTCCACCAAACGGCTGTCCTTGGGCACGC > 7:110790/1‑149 GCCCAACTTCGACCAACCCGTACCCAGCCTCGCCGACTGCCTTGGCCTGCTCGCCGCCGAATCGGCCAGCGTGCCCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5637799‑5637950‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgTCGCTGGCGGTCACCCCCAGGCCCGGGAACAGGAAGCGCTGGGCATGGCGCAGTTCGGCGCCGGCCGAGTTCAGGTAGGTTTGCTCGACCAGGCTCAGCCCCAGGCTGGCCTGCCAGTCCACCAAACGGCTGTCCTTGGGCACGC < NC_002947/5638011‑5637867 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |