| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5923982 | 77 (1.300) | 4 (0.070) | 4/242 | NT | 5.6% | coding (449/2874 nt) | gcvP‑II | glycine dehydrogenase |
| ? | NC_002947 | = 5924017 | 63 (1.130) | coding (414/2874 nt) | gcvP‑II | glycine dehydrogenase | |||||
GATCAGCTCAAAGCCGAAGCCTTCGGCGCGGGTCTTGAGTACCGATAGGGTCTGCGGATGGCAGTGCTCGTCGGCAAAGAAGGCGTTGCTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5923831‑5923982‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcatcgaCCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTCTTTGCCGACGAGCACTGCCATCCGCAGACCCTATCGGTA < NC_002947/5924017‑5923870 GATCAGCTCAAAGCCGAAGCCTTCGGCGCGGGTCTTGAGTACCGATAGGGTCTGCGGATGGCAGTGCTCGTCGGCAAAGAAGGCGTTGCTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCAT > 3:181830/1‑149GATCAGCTCAAAGCCGAAGCCTTCGGCGCGGGTCTTGAGTACCGATAGGGTCTGCGGATGGCAGTGCTCGTCGGCAAAGAAGGCGTTGCTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCAT > 6:274254/1‑149 ATAGGGTCTGCGGATGGCAGTGCTCGTCGGCAAAGAAGGCGTTGCTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGAT > 1:171783/1‑148 GGGTCTGCGGATGGCAGTGCTCGTCGGCAAAGAAGGCGTTGCTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAA < 2:171783/148‑1 ATGGCAGTGCTCGTCGGCAAAGAAGGCGTTGCTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGA > 3:77536/1‑137 ATGGCAGTGCTCGTCGGCAAAGAAGGCGTTGCTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGA < 4:77536/137‑1 CATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGTACGCAACAAGAGCAACGCCTTCTTTGCCGACGAGCACTGCCATCCGCAGACCCTAT < 1:215037/149‑1 ATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTCTTTGCCGACGAGCACTGCCATCCGCAGACCCTATC > 4:58952/1‑149 ATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTCTTTGCCGACGAGCACTGCCATCCGCAGACCCTATC < 6:312266/149‑1 ATCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTCTTTGCCGACGAGCACTGCCATCCGCAGACCCTAT < 8:19316/148‑1 TCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTCTTTGCCGACGAGCACTGCCATCCGCAGACCCTATCG > 8:336422/1‑149 TCGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTCTTTGCCGACGAGCACTGCCATCCGCAGACCCTATCG < 2:95222/149‑1 CGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAAC > 7:171323/1‑106 CGACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAAC < 8:171323/106‑1 ACCTCACCTGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTCTTTGCCGACGAGCACTGCCATCCGCAGACCCTATCGGTA < 8:233651/149‑1 ACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTCTTTGCCGACGAGCACTGCCATCCG > 7:276980/1‑134 ACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTCTTTGCCGACGAGCACTGCCATCCG < 8:276980/134‑1 ACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTCTTTGCCGACGA < 6:107418/121‑1 ACCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTCTTTGCCGACGA > 5:107418/1‑121 GATCAGCTCAAAGCCGAAGCCTTCGGCGCGGGTCTTGAGTACCGATAGGGTCTGCGGATGGCAGTGCTCGTCGGCAAAGAAGGCGTTGCTCTTGTTGCGTGCCACCCGCTTGGCCAGGGCCATGGCTTCGGCGGCAGCGGTGGCTTCATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5923831‑5923982‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcatcgaCCTCACCGGCCTGCCTCTGGCCAATGCCTCGCTGCTCGATGAAGCCACCGCTGCCGCCGAAGCCATGGCCCTGGCCAAGCGGGTGGCACGCAACAAGAGCAACGCCTTCTTTGCCGACGAGCACTGCCATCCGCAGACCCTATCGGTA < NC_002947/5924017‑5923870 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |