New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5926828 | 53 (0.900) | 3 (0.050) | 3/240 | NT | 5.7% | coding (1067/1623 nt) | PP_5195 | iron ABC transporter permease |
? | NC_002947 | = 5926850 | 49 (0.880) | coding (1045/1623 nt) | PP_5195 | iron ABC transporter permease |
ACCTAGCAGCAGCGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5926677‑5926828 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggcgcCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCGATCATGCTGGCCTTCAGTTACCTCGACAACCACCTGGTCATCCCGTTGTCCAGTTGGCTGGGC < NC_002947/5926850‑5926704 ACCTAGCAGCAGCGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGG > 5:332802/1‑149 ACCTAGCAGCAGCGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCAAGGCCAACCCCGG > 1:359046/1‑149 CCTAGCAGCAGCGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCG < 4:286734/147‑1 AGCAGCGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCCAGG > 8:347832/1‑149 AACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGT < 7:347832/149‑1 AACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTG > 1:318203/1‑143 AACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTG < 2:318203/143‑1 GGCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCGATCATGCTGGCCTTCAGTTACCTCGACAACCACCTGGTCATCCCGTTGTCCAGTTGGCTG < 3:194033/149‑1 GCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCGATCATGCTGGCCTTCAGTTACCTCGACAACCACCTGGTCATCCCGTTGTCCAGTTGGCTGG < 1:177492/149‑1 GCGCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCGATCATGCTGGCCTTCAGTTACCTCGACAACCACCTGGTCATCCCGTTGTCCAGTTGGCTGG > 2:177492/1‑149 GCCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCGATCATGCTGGCCTTCAGTTACCTCGACAACCACCTGGTCATCCCGTTGTCCAGTTGGCTGGGC > 5:168006/1‑149 ACCTAGCAGCAGCGGCTTGCCGGCGCCGCCCAGCCAACTGGACAACGGGATGACCAGGTGGTTGTCGAGGTAACTGAAGGCCAGCATGATCGATACCGCCAACACCGAACCGGGCAGGGCATACCCCAGATTGGCCAGGCCAACCCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5926677‑5926828 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggcgcCAGGCACCGACGGGCGGTATCCGCGCCGGGGTTGGCCTGGCCAATCTGGGGTATGCCCTGCCCGGTTCGGTGTTGGCGGTATCGATCATGCTGGCCTTCAGTTACCTCGACAACCACCTGGTCATCCCGTTGTCCAGTTGGCTGGGC < NC_002947/5926850‑5926704 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |