| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5927935 = | 55 (0.930) | 3 (0.060) | 3/210 | NT | 7.5% | intergenic (‑41/+112) | PP_5195/fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein |
| ? | NC_002947 | 5928009 = | 29 (0.600) | intergenic (‑115/+38) | PP_5195/fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein | |||||
GCCGGCAAGCGCCAGGCTGAAGCCATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5928103‑5927935‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggtttacccgcgaaAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGCAATTTCCACCGGAATGCTGTCGGCCTTGAAGCTGCCCCACGC > NC_002947/5928009‑5928145 GCCGGCAAGCGCCAGGCTGAAGCCATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGT < 6:252851/148‑1 CCGGCAAGCGCCAGGCTGAAGCCATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTA < 6:100774/148‑1 GCAAGCGCCAGGCTGAAGCCATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAG < 7:266906/149‑1 AAGCGCCAGGCTGAAGCCATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGT < 8:353782/142‑1 AAGCGCCAGGCTGAAGCCATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGT > 7:353782/1‑142 AGCGCCAGGCTGAAGCCATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGG < 7:35839/149‑1 GCGCCAGGCTGAAGCCATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGG < 2:259155/149‑1 AGGCTGAAGCCATTCGCCTGATGGATCGGGCTGGCTACAACTCAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGGTTTAC < 5:175755/149‑1 GCTGAAGCCATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGGagaactg > 1:135531/1‑142 GCTGAAGCCATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGG < 2:135531/141‑1 AAGCCATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGGTTTACCCGC < 7:15195/147‑1 CCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCT > 5:25638/1‑149 GGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGC > 4:74312/1‑65 GGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGC < 3:74312/65‑1 TAGGAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGCAATTTCCACCGGAATGCTGTCGGCCTTGAA < 5:101912/147‑1 GGAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGCAATTTCCACCGGAATGCTGTCGGCCTTGAAGCTG > 4:295366/1‑149 GGAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGCAATTTCCACCGGAATGCTGTCGGCCTTGAAGCTG > 6:13962/1‑149 GAGCGGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGCAATTTCCACCGGAATGCTGTCGGCCTTGAAGCTGC > 7:327679/1‑149 GCGGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGCAATTTCCACCGGAATGCTGTCGGCCTTGAAGCTGCCC < 2:94189/149‑1 GTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGCAATTTCCACCGGAATGCTGTCGGCCTTGAAGCTGCCCCACG > 1:237189/1‑149 GTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCAGGCAATTTCCACCGGAATGCTGTCGGCCTTGAAGCTGCCCCACG > 4:80343/1‑149 TTACCGGCTAACGGGCCTTAACGGGCCAAAATAGTATAAAGCATGGGGCTTAGTTGTAGCCAGCCCGATCAATCAGGGTAATGGCTTCAGCCTGGCGCTTGCCGGAAATTACCACCGGAATGCTGTCGGCCTTGAAGCTGCCCCACGC < 1:259155/148‑1 GCCGGCAAGCGCCAGGCTGAAGCCATTCGCCTGATGGATCGGGCTGGCTACAACTAAGCGCCAGGCTTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5928103‑5927935‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggtttacccgcgaaAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGCAATTTCCACCGGAATGCTGTCGGCCTTGAAGCTGCCCCACGC > NC_002947/5928009‑5928145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |