New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5932367	55 (0.930)	3 (0.050)	3/244	NT	5.2%	coding (1034/1335 nt)	pepP	proline aminopeptidase P II
	?	NC_002947	= 5932388	56 (0.990)					coding (1013/1335 nt)	pepP	proline aminopeptidase P II

CCTGATTGTCGGCGCCAATGTAGATACCCGGCTCCACGGTCAGCGCCATGCCGGGTTCCAGTACCCGCCACTCGCCGCCCACCTTGTACTCGCCCACGTCGTGCACATCCATGCCCAGCCAGTGCCCGGCGCGGTGCATGTAGAAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5932218‑5932367 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgcTGATCGAAAGCGAAGCCTATCGCGCCTTCTACATGCACCGCGCCGGGCACTGGCTGGGCATGGATGTGCACGACGTGGGCGAGTACAAGGTGGGCGGCGAGTGGCGGGTACTGGAACCCGGCATGGCGCTGACCGTGGAGCCGGGTAT  <  NC_002947/5932388‑5932241                                                                                                                                                                                                                                                                                                            CCTGATTGTCGGCGCCAATGTAGATACCCGGCTCCACGGTCAGCGCCATGCCGGGTTCCAGTACCCGCCACTCGCCGCCCACCTTGTACTCGCCCACGTCGTGCACATCCATGCCCAGCCAGTGCCCGGCGCGGTGCATGTAGAAGGCG                                                                                                                                                       <  3:18512/149‑1  CTGATTGTCGGCGCAAATGTAGATACCCGGCTCCACGGTCAGCGCCATGCCGGGTTACAGTACCCGCCACTCGCCGCCCACCTTGTACTCGCCCACGTCGTGCAGATCCATGCCCACCCAGTGCCCGGACCGGTGCATGTAGAAGGCGC                                                                                                                                                      >  8:332849/1‑149                                   CACGGTCAGCGCCATGCCGGGTTCCAGTACCCGCCACTCGCCGCCCACCTTGTACTCGCCCACGTCGTGCACATCCATGCCCAGCCAGTGCCCGGCGCGGTGCATGTAGAAGGCGCTGATCGAAAGCGAAGCCTATCGCGCCTTCTA                                                                                                                       <  1:101656/147‑1                                                                                                     GTGCACATCCATGCCCAGCCAGTGCCCGGCGCGGTGCATGTAGAAGGCGCTGATCGAAAGCGAAGCCTATCGCGCCTTCT                                                                                                                        >  5:338959/1‑80                                                                                                     GTGCACATCCATGCCCAGCCAGTGCCCGGCGCGGTGCATGTAGAAGGCGCTGATCGAAAGCGAAGCCTATCGCGCCTTCT                                                                                                                        <  6:338959/80‑1                                                                                                                                                  GGCGCTGATCGAAAGCGAAGCCTATCGCGCCTTCTACATGCACCGCGCCGGGCACTGGCTGGGCATGGATGTGCACGACGTGGGCGAGTACAAGGTGGGCGGCGAGTGGCGGGTACTGGAACCCGGCATGGCGCTGACCGTGGAGCCGG      <  1:92012/149‑1                                                                                                                                                     GCTGATCGAAAGCGAAGCCTATCGCGCCTTCTACATGCACCGCGCCGGGCACTGGCTGGGCATGGATGTGCACGACGTGGGCGAGTACAAGGTGGGCGGCGAGTGGCGGGTACTGGAACCCGGCATGGCGCTGACCGTGGAGCCGGGTA   <  8:103366/149‑1                                                                                                                                                      CTGATCGAAAGCGAAGCCTATCGCGCCTTCTACATGCACCGCGCCGGGCACTGGCTGGGCATGGATGTGCACGACGTGGGCGAGTACAAGGTGGGCGGCGAGTGGCGGGTACTGGAACCCGGCATGGCGCTGACCGTGGAGCCGGGTAT  <  4:77585/149‑1                                                                                                                                                                                                                                                                                                            CCTGATTGTCGGCGCCAATGTAGATACCCGGCTCCACGGTCAGCGCCATGCCGGGTTCCAGTACCCGCCACTCGCCGCCCACCTTGTACTCGCCCACGTCGTGCACATCCATGCCCAGCCAGTGCCCGGCGCGGTGCATGTAGAAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5932218‑5932367 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgcTGATCGAAAGCGAAGCCTATCGCGCCTTCTACATGCACCGCGCCGGGCACTGGCTGGGCATGGATGTGCACGACGTGGGCGAGTACAAGGTGGGCGGCGAGTGGCGGGTACTGGAACCCGGCATGGCGCTGACCGTGGAGCCGGGTAT  <  NC_002947/5932388‑5932241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.