New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5932779 =	60 (1.020)	5 (0.090)	5/254	NT	7.4%	coding (622/1335 nt)	pepP	proline aminopeptidase P II
	?	NC_002947	5932808 =	65 (1.110)					coding (593/1335 nt)	pepP	proline aminopeptidase P II

GTTGCGCTGGATCATCTGCTGCACGATATGCGCCTGTATAAATCGGCGGCGGAAGTGAAGGTGATGCGTGCTGCCGCGGACATTTCTGCGCGGGCCCATGTGCGGGCCATGCAGGCCTGCCGCGCCGGGCTGCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5932914‑5932779 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGCCCGCACATGGGCCCGCGCAGAAATGTCCGCGGCAGCACGCATCACCTTCACTTCCGCCGCCGATTTATACAGGCGCATATCGTGCAGCAGATGATCCAGCGCAACGAACTCGTTCGGTGGCTGGGC  >  NC_002947/5932808‑5932935                                                                                                                                                                                                                                                                          GTTGCGCTGGATCATCTGCTGCACGATATGCGCCTGTATAAATCGGCGGCGGAAGTGAAGGTGATGCGTGCTGCCGCGGACATTTCTGCGCGGGCCCATGTGCGGGCCGTGCAGCCCGGCGCGGCAGGCCTGCATGGCCCGCACATGG                                                                                                                      <  5:223791/148‑1                                                                                                      GCGGGCCATGCAGGCCTGCCGCGCCGGGCTGCATGGCCCGCACATGGGCCCGCGCAGAAATGTCCGCGGCAGCACGCATCACCTTCACTTCCGCCGCCGATTTATACAGGCGCATATCGTGCAGCAGATGATCCAGCGCAACGAACTCG                >  2:131762/1‑149                                                                                                         GGCCATGCAGGCCTGCCGCGCCGGGCTGCACGGCCCGCACATGGGCCCGCGCAGAAATGTCCGCGGCAGCACGCATCACCTTCACTTCCGCCGCCGAT                                                                >  1:9311/1‑98                                                                                                         GGCCATGCAGGCCTGCCGCGCCGGGCTGCACGGCCCGCACATGGGCCCGCGCAGAAATGTCCGCGGCAGCACGCATCACCTTCACTTCCGCCGCCGAT                                                                <  2:9311/98‑1                                                                                                                    CCTGCCGCGCCGGGCTGCATGGCCCGCACATGGGCCCGCGCAGAAATGTCCGCGGCAGCACGCATCACCTTCACTTCCGCCGCCGATTTATACAGGCGCATATCGTGCAGCAGATGATCCAGCGCAACGAACTCGTTCGGTGGCTGGGC  <  1:131762/149‑1                                                                                                                                                                                                                                                                          GTTGCGCTGGATCATCTGCTGCACGATATGCGCCTGTATAAATCGGCGGCGGAAGTGAAGGTGATGCGTGCTGCCGCGGACATTTCTGCGCGGGCCCATGTGCGGGCCATGCAGGCCTGCCGCGCCGGGCTGCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5932914‑5932779 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGCCCGCACATGGGCCCGCGCAGAAATGTCCGCGGCAGCACGCATCACCTTCACTTCCGCCGCCGATTTATACAGGCGCATATCGTGCAGCAGATGATCCAGCGCAACGAACTCGTTCGGTGGCTGGGC  >  NC_002947/5932808‑5932935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.