New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5933742 = | 70 (1.180) | 4 (0.070) | 4/246 | NT | 6.6% | coding (235/555 nt) | PP_5201 | hypothetical protein |
? | NC_002947 | 5933781 = | 46 (0.810) | coding (196/555 nt) | PP_5201 | hypothetical protein |
CGGCCTGCTGATTGGCCGCAGCTGCGCCGGCGCCGGCTTCGATGCCGATGCCTGGTTGGCCGATGCCGCCCAACTGCTGGAAATCGAGCCTGGTGACAGTGTCCGCAATGCCTTGGTCGGCTTGCAGGAAATGGTCAAGGGCGAGCTGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5933893‑5933742 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccaAGGCATTGCGGACACTGTCACCAGGCTCGATTTCCAGCAGTTGGGCGGCATCGGCCAACCAGGCATCGGCATCGAAGCCGGCGCCGGCGCAGCTGCGGCCAATCAGCAGGCCGTGCAGTTCGGCCGGGGTGACAGGATGGCCATTG > NC_002947/5933781‑5933926 CGGCCTGCTGATTGGCCGCAGCTGCGCCGGCGCCGGCTTCGATGCCGATGCCTGGTTGGCCGATGCCGCCCATCTGCTGGAAATCGAGCCTGGTGACAGTGTCCGCAATGCCTTGGTCGGCTTGCAGGAAATGGTCAAGGGCGAGCTGA < 1:238443/149‑1 GGCCTGCTGATTGGCCGCAGCTGCGCCGGCGCCGGCTTCGATGCCGATGCCTGGTTGGCCGATGCCGCCCAACTGCTGGAAATCGAGCCTGGTGACAGTGTCCGCAATGCCTTGGTCGGCTTGCAGGAAATGGTCAAGGGCGAGCTGAC < 7:9591/149‑1 GCTGATTGGCCGCAGCTGCGCCGGCGCCGGCTTCGATGCCGATGCCTGGTTGGCCGATGCCGCCCAACTGCTGGAAATCGAGCCTGGTGACAGTGTCCGCAATGCCTTGGTCGGCTTGCAGGAAATGGTCAAGGGCGAGCTGAC < 7:272074/144‑1 GCTGATTGGCCGCAGCTGCGCCGGCGCCGGCTTCGATGCCGATGCCTGGTTGGCCGATGCCGCCCAACTGCTGGAAATCGAGCCTGGTGACAGTGTCCGCAATGCCTTGGTCGGCTTGCAGGAAATGGTCAAGGGCGAGCTGAC > 8:272074/1‑144 GTCGGCTTGCAGGAAATGGTCAAGGGCGAGCTGACCAAGGCATTGCGGACACTGTCACCAGGCTCGATTTCCAGCAGTTGGGCGGCATCGGCCAACCAGGCATCGGCATCGAAGCCGGCGCCGGCGCAGCTGCGGC > 3:89515/1‑136 GTCGGCTTGCAGGAAATGGTCAAGGGCGAGCTGACCAAGGCATTGCGGACACTGTCACCAGGCTCGATTTCCAGCAGTTGGGCGGCATCGGCCAACCAGGCATCGGCATCGAAGCCGGCGCCGGCGCAGCTGCGGC < 4:89515/136‑1 GGCTTGCAGGAAATGGTCAAGGGCGAGCTGACCAAGGCATTGCGGACACTGTCACCAGGCTCGATTTCCAGCAGTTGGGCGGCATCGGCCAACCAGGCATCGGCATCGAAGCCGGCGCCG > 1:87095/1‑120 GGCTTGCAGGAAATGGTCAAGGGCGAGCTGACCAAGGCATTGCGGACACTGTCACCAGGCTCGATTTCCAGCAGTTGGGCGGCATCGGCCAACCAGGCATCGGCATCGAAGCCGGCGCCG < 2:87095/120‑1 ACCAAGGCATTGCGGACACTGTCACCAGGCTCGATTTCCAGCAGTTGGGCGGCATCGGCCAACCAGGCATCGGCATCGAAGCCGGCGCCGGCGCAGCTGCGGCCAATCAGCAGGCCGTGCAGTTCGGCCGGGGTGAC > 1:89726/1‑137 ACCAAGGCATTGCGGACACTGTCACCAGGCTCGATTTCCAGCAGTTGGGCGGCATCGGCCAACCAGGCATCGGCATCGAAGCCGGCGCCGGCGCAGCTGCGGCCAATCAGCAGGCCGTGCAGTTCGGCCGGGGTGAC < 2:89726/137‑1 CCAAGGCATTGCGGACACTGTCACCAGGCTCGATTTCCAGCAGTTGGGCGGCATCGGCCAACCAGGCATCGGCATCGAAGCCGGCGCCGGCGCAGCTGCGGCCAATCAGCAGGCCGTGCAGTTCGGCCGGGGTGACAGGATGGCCATTG > 2:291238/1‑149 CGGCCTGCTGATTGGCCGCAGCTGCGCCGGCGCCGGCTTCGATGCCGATGCCTGGTTGGCCGATGCCGCCCAACTGCTGGAAATCGAGCCTGGTGACAGTGTCCGCAATGCCTTGGTCGGCTTGCAGGAAATGGTCAAGGGCGAGCTGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5933893‑5933742 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccaAGGCATTGCGGACACTGTCACCAGGCTCGATTTCCAGCAGTTGGGCGGCATCGGCCAACCAGGCATCGGCATCGAAGCCGGCGCCGGCGCAGCTGCGGCCAATCAGCAGGCCGTGCAGTTCGGCCGGGGTGACAGGATGGCCATTG > NC_002947/5933781‑5933926 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |